Gene : Sobic.001G404100 S. bicolor v3.1.1
Defline:  (1 of 1) K03237 - translation initiation factor 2 subunit 1 (EIF2S1) Genomic Order:  4233
Name:  ? Sobic.001G404100 Secondary Identifier:  ? PAC:37944732
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G404100 0.5kb upstream 0.5kb upstream 3956 true Chr01: 68904985-68908940 Sorghum bicolor
Sobic.001G404100 0.5kb upstream 0.5kb upstream 500 false Chr01: 68908441-68908940 Sorghum bicolor
Sobic.001G404100 0.5kb downstream 0.5kb downstream 3956 true Chr01: 68904485-68908440 Sorghum bicolor
Sobic.001G404100 0.5kb downstream 0.5kb downstream 500 false Chr01: 68904485-68904984 Sorghum bicolor
Sobic.001G404100 1.0kb upstream 1.0kb upstream 4456 true Chr01: 68904985-68909440 Sorghum bicolor
Sobic.001G404100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 68908441-68909440 Sorghum bicolor
Sobic.001G404100 1.0kb downstream 1.0kb downstream 4456 true Chr01: 68903985-68908440 Sorghum bicolor
Sobic.001G404100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 68903985-68904984 Sorghum bicolor
Sobic.001G404100 2.0kb upstream 2.0kb upstream 5456 true Chr01: 68904985-68910440 Sorghum bicolor
Sobic.001G404100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 68908441-68910440 Sorghum bicolor
Sobic.001G404100 2.0kb downstream 2.0kb downstream 5456 true Chr01: 68902985-68908440 Sorghum bicolor
Sobic.001G404100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 68902985-68904984 Sorghum bicolor
Sobic.001G404100 5.0kb upstream 5.0kb upstream 8456 true Chr01: 68904985-68913440 Sorghum bicolor
Sobic.001G404100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 68908441-68913440 Sorghum bicolor
Sobic.001G404100 5.0kb downstream 5.0kb downstream 8456 true Chr01: 68899985-68908440 Sorghum bicolor
Sobic.001G404100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 68899985-68904984 Sorghum bicolor
Sobic.001G404100 10.0kb upstream 10.0kb upstream 13456 true Chr01: 68904985-68918440 Sorghum bicolor
Sobic.001G404100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 68908441-68918440 Sorghum bicolor
Sobic.001G404100 10.0kb downstream 10.0kb downstream 13456 true Chr01: 68894985-68908440 Sorghum bicolor
Sobic.001G404100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 68894985-68904984 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185831 5267 Panicoideae View MSA
124574377 5269 Grass View MSA
122043583 5273 Angiosperm View MSA
121345071 5274 Embryophyte View MSA
123424758 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 95.635     High High
cufflinks 7.97     High Low
cufflinks 14.9     High Low
cufflinks 27.991     High  
cufflinks 27.515     High  
cufflinks 18.248     High  
cufflinks 28.96     High  
cufflinks 10.5     High Low
cufflinks 28.279     High  
cufflinks 31.625     High  
cufflinks 40.067     High  
cufflinks 33.289     High  
cufflinks 22.571     High  
cufflinks 42.648     High  
cufflinks 22.417     High  
cufflinks 14.953     High Low
cufflinks 30.637     High  
cufflinks 32.171     High  
cufflinks 13.458     High Low
cufflinks 29.17     High  
cufflinks 31.316     High  
cufflinks 56.829     High High
cufflinks 47.654     High  
cufflinks 49.622     High High
cufflinks 11.538     High Low
cufflinks 6.753     High Low
cufflinks 26.439     High  
cufflinks 43.265     High  
cufflinks 26.03     High  
cufflinks 34.208     High  

0 Strain