Gene : Sobic.005G155700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12176:SF16 - PROTEIN C17E4.11 Genomic Order:  1658
Name:  ? Sobic.005G155700 Secondary Identifier:  ? PAC:37925149
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G155700 0.5kb upstream 0.5kb upstream 3732 true Chr05: 62720689-62724420 Sorghum bicolor
Sobic.005G155700 0.5kb upstream 0.5kb upstream 500 false Chr05: 62720689-62721188 Sorghum bicolor
Sobic.005G155700 0.5kb downstream 0.5kb downstream 3732 true Chr05: 62721189-62724920 Sorghum bicolor
Sobic.005G155700 0.5kb downstream 0.5kb downstream 500 false Chr05: 62724421-62724920 Sorghum bicolor
Sobic.005G155700 1.0kb upstream 1.0kb upstream 4232 true Chr05: 62720189-62724420 Sorghum bicolor
Sobic.005G155700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 62720189-62721188 Sorghum bicolor
Sobic.005G155700 1.0kb downstream 1.0kb downstream 4232 true Chr05: 62721189-62725420 Sorghum bicolor
Sobic.005G155700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 62724421-62725420 Sorghum bicolor
Sobic.005G155700 2.0kb upstream 2.0kb upstream 5232 true Chr05: 62719189-62724420 Sorghum bicolor
Sobic.005G155700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 62719189-62721188 Sorghum bicolor
Sobic.005G155700 2.0kb downstream 2.0kb downstream 5232 true Chr05: 62721189-62726420 Sorghum bicolor
Sobic.005G155700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 62724421-62726420 Sorghum bicolor
Sobic.005G155700 5.0kb upstream 5.0kb upstream 8232 true Chr05: 62716189-62724420 Sorghum bicolor
Sobic.005G155700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 62716189-62721188 Sorghum bicolor
Sobic.005G155700 5.0kb downstream 5.0kb downstream 8232 true Chr05: 62721189-62729420 Sorghum bicolor
Sobic.005G155700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 62724421-62729420 Sorghum bicolor
Sobic.005G155700 10.0kb upstream 10.0kb upstream 13232 true Chr05: 62711189-62724420 Sorghum bicolor
Sobic.005G155700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 62711189-62721188 Sorghum bicolor
Sobic.005G155700 10.0kb downstream 10.0kb downstream 13232 true Chr05: 62721189-62734420 Sorghum bicolor
Sobic.005G155700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 62724421-62734420 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178930 5267 Panicoideae View MSA
124582250 5269 Grass View MSA
122046876 5273 Angiosperm View MSA
121344450 5274 Embryophyte View MSA
123426760 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.375       High
cufflinks 0.47       Low
cufflinks 0.685       Low
cufflinks 2.043       High
cufflinks 0.875        
cufflinks 1.502        
cufflinks 1.475        
cufflinks 1.047        
cufflinks 1.347        
cufflinks 1.78        
cufflinks 2.194       High
cufflinks 1.13        
cufflinks 0.932        
cufflinks 1.564        
cufflinks 1.031        
cufflinks 0.469       Low
cufflinks 1.505        
cufflinks 1.424        
cufflinks 0.889        
cufflinks 0.949        
cufflinks 1.549        
cufflinks 1.832        
cufflinks 1.96       High
cufflinks 1.748        
cufflinks 0.765       Low
cufflinks 0.513       Low
cufflinks 0.902        
cufflinks 0.913        
cufflinks 1.651        
cufflinks 1.526        

0 Strain