Gene : Sobic.001G396300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33921//PTHR33921:SF2 - FAMILY NOT NAMED // CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED Genomic Order:  4148
Name:  ? Sobic.001G396300 Secondary Identifier:  ? PAC:37942463
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G396300 0.5kb upstream 0.5kb upstream 893 true Chr01: 68191067-68191959 Sorghum bicolor
Sobic.001G396300 0.5kb upstream 0.5kb upstream 500 false Chr01: 68191460-68191959 Sorghum bicolor
Sobic.001G396300 0.5kb downstream 0.5kb downstream 893 true Chr01: 68190567-68191459 Sorghum bicolor
Sobic.001G396300 0.5kb downstream 0.5kb downstream 500 false Chr01: 68190567-68191066 Sorghum bicolor
Sobic.001G396300 1.0kb upstream 1.0kb upstream 1393 true Chr01: 68191067-68192459 Sorghum bicolor
Sobic.001G396300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 68191460-68192459 Sorghum bicolor
Sobic.001G396300 1.0kb downstream 1.0kb downstream 1393 true Chr01: 68190067-68191459 Sorghum bicolor
Sobic.001G396300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 68190067-68191066 Sorghum bicolor
Sobic.001G396300 2.0kb upstream 2.0kb upstream 2393 true Chr01: 68191067-68193459 Sorghum bicolor
Sobic.001G396300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 68191460-68193459 Sorghum bicolor
Sobic.001G396300 2.0kb downstream 2.0kb downstream 2393 true Chr01: 68189067-68191459 Sorghum bicolor
Sobic.001G396300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 68189067-68191066 Sorghum bicolor
Sobic.001G396300 5.0kb upstream 5.0kb upstream 5393 true Chr01: 68191067-68196459 Sorghum bicolor
Sobic.001G396300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 68191460-68196459 Sorghum bicolor
Sobic.001G396300 5.0kb downstream 5.0kb downstream 5393 true Chr01: 68186067-68191459 Sorghum bicolor
Sobic.001G396300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 68186067-68191066 Sorghum bicolor
Sobic.001G396300 10.0kb upstream 10.0kb upstream 10393 true Chr01: 68191067-68201459 Sorghum bicolor
Sobic.001G396300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 68191460-68201459 Sorghum bicolor
Sobic.001G396300 10.0kb downstream 10.0kb downstream 10393 true Chr01: 68181067-68191459 Sorghum bicolor
Sobic.001G396300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 68181067-68191066 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189240 5267 Panicoideae View MSA
124571064 5269 Grass View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.54        
cufflinks 1.322       Low
cufflinks 9.531        
cufflinks 222.613     High High
cufflinks 16.049     High  
cufflinks 158.944     High High
cufflinks 17.293     High  
cufflinks 21.874     High  
cufflinks 97.808     High High
cufflinks 76.163     High High
cufflinks 0.074     Low Low
cufflinks 2.493        
cufflinks 38.442     High  
cufflinks 1.354       Low
cufflinks 17.903     High  
cufflinks 3.565        
cufflinks 19.579     High  
cufflinks 16.078     High  
cufflinks 4.553        
cufflinks 50.939     High  
cufflinks 5.817        
cufflinks 0.758       Low
cufflinks 1.696        
cufflinks 1.161       Low
cufflinks 1.48       Low
cufflinks 2.607        
cufflinks 4.14        
cufflinks 81.064     High High
cufflinks 57.461     High  
cufflinks 28.21     High  

0 Strain