Gene : Sobic.001G397000 S. bicolor v3.1.1
Defline:  (1 of 1) 4.3.2.1 - Argininosuccinate lyase / Omega-N-(L-arginino)succinate arginine-lyase Genomic Order:  4156
Name:  ? Sobic.001G397000 Secondary Identifier:  ? PAC:37940808
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor ARGSYNBSUB-PWY Sorghum bicolor pathologic  
Sbicolor ARGSYN-PWY Sorghum bicolor pathologic  
Sbicolor PWY-4984 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G397000 0.5kb upstream 0.5kb upstream 4765 true Chr01: 68238095-68242859 Sorghum bicolor
Sobic.001G397000 0.5kb upstream 0.5kb upstream 500 false Chr01: 68242360-68242859 Sorghum bicolor
Sobic.001G397000 0.5kb downstream 0.5kb downstream 4765 true Chr01: 68237595-68242359 Sorghum bicolor
Sobic.001G397000 0.5kb downstream 0.5kb downstream 500 false Chr01: 68237595-68238094 Sorghum bicolor
Sobic.001G397000 1.0kb upstream 1.0kb upstream 5265 true Chr01: 68238095-68243359 Sorghum bicolor
Sobic.001G397000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 68242360-68243359 Sorghum bicolor
Sobic.001G397000 1.0kb downstream 1.0kb downstream 5265 true Chr01: 68237095-68242359 Sorghum bicolor
Sobic.001G397000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 68237095-68238094 Sorghum bicolor
Sobic.001G397000 2.0kb upstream 2.0kb upstream 6265 true Chr01: 68238095-68244359 Sorghum bicolor
Sobic.001G397000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 68242360-68244359 Sorghum bicolor
Sobic.001G397000 2.0kb downstream 2.0kb downstream 6265 true Chr01: 68236095-68242359 Sorghum bicolor
Sobic.001G397000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 68236095-68238094 Sorghum bicolor
Sobic.001G397000 5.0kb upstream 5.0kb upstream 9265 true Chr01: 68238095-68247359 Sorghum bicolor
Sobic.001G397000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 68242360-68247359 Sorghum bicolor
Sobic.001G397000 5.0kb downstream 5.0kb downstream 9265 true Chr01: 68233095-68242359 Sorghum bicolor
Sobic.001G397000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 68233095-68238094 Sorghum bicolor
Sobic.001G397000 10.0kb upstream 10.0kb upstream 14265 true Chr01: 68238095-68252359 Sorghum bicolor
Sobic.001G397000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 68242360-68252359 Sorghum bicolor
Sobic.001G397000 10.0kb downstream 10.0kb downstream 14265 true Chr01: 68228095-68242359 Sorghum bicolor
Sobic.001G397000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 68228095-68238094 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185021 5267 Panicoideae View MSA
124587066 5269 Grass View MSA
122042713 5273 Angiosperm View MSA
121348012 5274 Embryophyte View MSA
123425027 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.912     High  
cufflinks 0.616       Low
cufflinks 1.88       Low
cufflinks 2.046       Low
cufflinks 16.937     High  
cufflinks 4.195        
cufflinks 5.066        
cufflinks 1.141       Low
cufflinks 6.886        
cufflinks 5.908        
cufflinks 16.098     High  
cufflinks 8.538        
cufflinks 6.05        
cufflinks 15.177     High  
cufflinks 6.195        
cufflinks 1.591       Low
cufflinks 4.827        
cufflinks 5.519        
cufflinks 2.052       Low
cufflinks 2.941        
cufflinks 16.488     High  
cufflinks 18.539     High High
cufflinks 15.365     High  
cufflinks 18.03     High High
cufflinks 0.56       Low
cufflinks 0.404       Low
cufflinks 8.665        
cufflinks 7.48        
cufflinks 5.186        
cufflinks 10.86        

0 Strain