Gene : Sobic.001G393600 S. bicolor v3.1.1
Defline:  (1 of 41) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  4119
Name:  ? Sobic.001G393600 Secondary Identifier:  ? PAC:37937405
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G393600 0.5kb upstream 0.5kb upstream 2531 true Chr01: 67991484-67994014 Sorghum bicolor
Sobic.001G393600 0.5kb upstream 0.5kb upstream 500 false Chr01: 67991484-67991983 Sorghum bicolor
Sobic.001G393600 0.5kb downstream 0.5kb downstream 2531 true Chr01: 67991984-67994514 Sorghum bicolor
Sobic.001G393600 0.5kb downstream 0.5kb downstream 500 false Chr01: 67994015-67994514 Sorghum bicolor
Sobic.001G393600 1.0kb upstream 1.0kb upstream 3031 true Chr01: 67990984-67994014 Sorghum bicolor
Sobic.001G393600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 67990984-67991983 Sorghum bicolor
Sobic.001G393600 1.0kb downstream 1.0kb downstream 3031 true Chr01: 67991984-67995014 Sorghum bicolor
Sobic.001G393600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 67994015-67995014 Sorghum bicolor
Sobic.001G393600 2.0kb upstream 2.0kb upstream 4031 true Chr01: 67989984-67994014 Sorghum bicolor
Sobic.001G393600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 67989984-67991983 Sorghum bicolor
Sobic.001G393600 2.0kb downstream 2.0kb downstream 4031 true Chr01: 67991984-67996014 Sorghum bicolor
Sobic.001G393600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 67994015-67996014 Sorghum bicolor
Sobic.001G393600 5.0kb upstream 5.0kb upstream 7031 true Chr01: 67986984-67994014 Sorghum bicolor
Sobic.001G393600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 67986984-67991983 Sorghum bicolor
Sobic.001G393600 5.0kb downstream 5.0kb downstream 7031 true Chr01: 67991984-67999014 Sorghum bicolor
Sobic.001G393600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 67994015-67999014 Sorghum bicolor
Sobic.001G393600 10.0kb upstream 10.0kb upstream 12031 true Chr01: 67981984-67994014 Sorghum bicolor
Sobic.001G393600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 67981984-67991983 Sorghum bicolor
Sobic.001G393600 10.0kb downstream 10.0kb downstream 12031 true Chr01: 67991984-68004014 Sorghum bicolor
Sobic.001G393600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 67994015-68004014 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993377 5273 Angiosperm View MSA
122186683 5267 Panicoideae View MSA
124577922 5269 Grass View MSA
121263662 5274 Embryophyte View MSA
123302178 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.561       High
cufflinks 0.038     Low  
cufflinks 0.394        
cufflinks 0.636       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.099     Low  
cufflinks 0.05     Low  
cufflinks 0.017     Low Low
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.233        
cufflinks 0.231        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.268        
cufflinks 0.142        
cufflinks 0.315        
cufflinks 0.04     Low  
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.028     Low Low
cufflinks 0.351        
cufflinks 0.25        
cufflinks 0.231        
cufflinks 0.037     Low  
cufflinks 0.019     Low Low
cufflinks 0.965       High
cufflinks 1.647       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087        

0 Strain