Gene : Sobic.001G395300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10381//PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC Genomic Order:  4137
Name:  ? Sobic.001G395300 Secondary Identifier:  ? PAC:37942274
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G395300 0.5kb upstream 0.5kb upstream 3590 true Chr01: 68124732-68128321 Sorghum bicolor
Sobic.001G395300 0.5kb upstream 0.5kb upstream 500 false Chr01: 68124732-68125231 Sorghum bicolor
Sobic.001G395300 0.5kb downstream 0.5kb downstream 3590 true Chr01: 68125232-68128821 Sorghum bicolor
Sobic.001G395300 0.5kb downstream 0.5kb downstream 500 false Chr01: 68128322-68128821 Sorghum bicolor
Sobic.001G395300 1.0kb upstream 1.0kb upstream 4090 true Chr01: 68124232-68128321 Sorghum bicolor
Sobic.001G395300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 68124232-68125231 Sorghum bicolor
Sobic.001G395300 1.0kb downstream 1.0kb downstream 4090 true Chr01: 68125232-68129321 Sorghum bicolor
Sobic.001G395300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 68128322-68129321 Sorghum bicolor
Sobic.001G395300 2.0kb upstream 2.0kb upstream 5090 true Chr01: 68123232-68128321 Sorghum bicolor
Sobic.001G395300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 68123232-68125231 Sorghum bicolor
Sobic.001G395300 2.0kb downstream 2.0kb downstream 5090 true Chr01: 68125232-68130321 Sorghum bicolor
Sobic.001G395300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 68128322-68130321 Sorghum bicolor
Sobic.001G395300 5.0kb upstream 5.0kb upstream 8090 true Chr01: 68120232-68128321 Sorghum bicolor
Sobic.001G395300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 68120232-68125231 Sorghum bicolor
Sobic.001G395300 5.0kb downstream 5.0kb downstream 8090 true Chr01: 68125232-68133321 Sorghum bicolor
Sobic.001G395300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 68128322-68133321 Sorghum bicolor
Sobic.001G395300 10.0kb upstream 10.0kb upstream 13090 true Chr01: 68115232-68128321 Sorghum bicolor
Sobic.001G395300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 68115232-68125231 Sorghum bicolor
Sobic.001G395300 10.0kb downstream 10.0kb downstream 13090 true Chr01: 68125232-68138321 Sorghum bicolor
Sobic.001G395300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 68128322-68138321 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198561 5267 Panicoideae View MSA
124576091 5269 Grass View MSA
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.383     High  
cufflinks 4.566       Low
cufflinks 12.909     High  
cufflinks 13.152     High  
cufflinks 15.791     High  
cufflinks 8.146        
cufflinks 32.9     High High
cufflinks 16.477     High  
cufflinks 10.197        
cufflinks 10.114        
cufflinks 7.366        
cufflinks 4.985        
cufflinks 4.392       Low
cufflinks 5.642        
cufflinks 10.196        
cufflinks 8.28        
cufflinks 34.921     High High
cufflinks 45.044     High High
cufflinks 4.261       Low
cufflinks 15.881     High  
cufflinks 21.322     High  
cufflinks 10.259        
cufflinks 7.245        
cufflinks 7.888        
cufflinks 1.274       Low
cufflinks 2.332       Low
cufflinks 6.715        
cufflinks 9.995     High  
cufflinks 70.891     High High
cufflinks 19.075     High  

0 Strain