Gene : Sobic.001G391200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12847//PTHR12847:SF5 - ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED // CCR4-ASSOCIATED FACTOR 16 Genomic Order:  4095
Name:  ? Sobic.001G391200 Secondary Identifier:  ? PAC:37939884
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G391200 0.5kb upstream 0.5kb upstream 4101 true Chr01: 67750627-67754727 Sorghum bicolor
Sobic.001G391200 0.5kb upstream 0.5kb upstream 500 false Chr01: 67754228-67754727 Sorghum bicolor
Sobic.001G391200 0.5kb downstream 0.5kb downstream 4101 true Chr01: 67750127-67754227 Sorghum bicolor
Sobic.001G391200 0.5kb downstream 0.5kb downstream 500 false Chr01: 67750127-67750626 Sorghum bicolor
Sobic.001G391200 1.0kb upstream 1.0kb upstream 4601 true Chr01: 67750627-67755227 Sorghum bicolor
Sobic.001G391200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 67754228-67755227 Sorghum bicolor
Sobic.001G391200 1.0kb downstream 1.0kb downstream 4601 true Chr01: 67749627-67754227 Sorghum bicolor
Sobic.001G391200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 67749627-67750626 Sorghum bicolor
Sobic.001G391200 2.0kb upstream 2.0kb upstream 5601 true Chr01: 67750627-67756227 Sorghum bicolor
Sobic.001G391200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 67754228-67756227 Sorghum bicolor
Sobic.001G391200 2.0kb downstream 2.0kb downstream 5601 true Chr01: 67748627-67754227 Sorghum bicolor
Sobic.001G391200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 67748627-67750626 Sorghum bicolor
Sobic.001G391200 5.0kb upstream 5.0kb upstream 8601 true Chr01: 67750627-67759227 Sorghum bicolor
Sobic.001G391200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 67754228-67759227 Sorghum bicolor
Sobic.001G391200 5.0kb downstream 5.0kb downstream 8601 true Chr01: 67745627-67754227 Sorghum bicolor
Sobic.001G391200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 67745627-67750626 Sorghum bicolor
Sobic.001G391200 10.0kb upstream 10.0kb upstream 13601 true Chr01: 67750627-67764227 Sorghum bicolor
Sobic.001G391200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 67754228-67764227 Sorghum bicolor
Sobic.001G391200 10.0kb downstream 10.0kb downstream 13601 true Chr01: 67740627-67754227 Sorghum bicolor
Sobic.001G391200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 67740627-67750626 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178705 5267 Panicoideae View MSA
124575032 5269 Grass View MSA
122046075 5273 Angiosperm View MSA
121344435 5274 Embryophyte View MSA
123425929 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.189        
cufflinks 15.315     High High
cufflinks 12.91     High High
cufflinks 8.427        
cufflinks 3.085       Low
cufflinks 7.46        
cufflinks 10.442        
cufflinks 11.894     High High
cufflinks 4.097       Low
cufflinks 4.183       Low
cufflinks 5.142        
cufflinks 6.866        
cufflinks 8.885        
cufflinks 6.287        
cufflinks 8.963        
cufflinks 12.199     High High
cufflinks 12.091     High High
cufflinks 10.895        
cufflinks 12.488     High High
cufflinks 13.999     High High
cufflinks 1.979       Low
cufflinks 6.588        
cufflinks 6.233        
cufflinks 5.95        
cufflinks 9.865     High  
cufflinks 10.335     High  
cufflinks 5.729        
cufflinks 10.804     High  
cufflinks 8.498        
cufflinks 6.316        

0 Strain