Gene : Sobic.001G392000 S. bicolor v3.1.1
Defline:  (1 of 6) PF07676 - WD40-like Beta Propeller Repeat (PD40) Genomic Order:  4102
Name:  ? Sobic.001G392000 Secondary Identifier:  ? PAC:37943253
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G392000 0.5kb upstream 0.5kb upstream 3208 true Chr01: 67838911-67842118 Sorghum bicolor
Sobic.001G392000 0.5kb upstream 0.5kb upstream 500 false Chr01: 67841619-67842118 Sorghum bicolor
Sobic.001G392000 0.5kb downstream 0.5kb downstream 3208 true Chr01: 67838411-67841618 Sorghum bicolor
Sobic.001G392000 0.5kb downstream 0.5kb downstream 500 false Chr01: 67838411-67838910 Sorghum bicolor
Sobic.001G392000 1.0kb upstream 1.0kb upstream 3708 true Chr01: 67838911-67842618 Sorghum bicolor
Sobic.001G392000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 67841619-67842618 Sorghum bicolor
Sobic.001G392000 1.0kb downstream 1.0kb downstream 3708 true Chr01: 67837911-67841618 Sorghum bicolor
Sobic.001G392000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 67837911-67838910 Sorghum bicolor
Sobic.001G392000 2.0kb upstream 2.0kb upstream 4708 true Chr01: 67838911-67843618 Sorghum bicolor
Sobic.001G392000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 67841619-67843618 Sorghum bicolor
Sobic.001G392000 2.0kb downstream 2.0kb downstream 4708 true Chr01: 67836911-67841618 Sorghum bicolor
Sobic.001G392000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 67836911-67838910 Sorghum bicolor
Sobic.001G392000 5.0kb upstream 5.0kb upstream 7708 true Chr01: 67838911-67846618 Sorghum bicolor
Sobic.001G392000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 67841619-67846618 Sorghum bicolor
Sobic.001G392000 5.0kb downstream 5.0kb downstream 7708 true Chr01: 67833911-67841618 Sorghum bicolor
Sobic.001G392000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 67833911-67838910 Sorghum bicolor
Sobic.001G392000 10.0kb upstream 10.0kb upstream 12708 true Chr01: 67838911-67851618 Sorghum bicolor
Sobic.001G392000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 67841619-67851618 Sorghum bicolor
Sobic.001G392000 10.0kb downstream 10.0kb downstream 12708 true Chr01: 67828911-67841618 Sorghum bicolor
Sobic.001G392000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 67828911-67838910 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028106 5273 Angiosperm View MSA
122192807 5267 Panicoideae View MSA
124587409 5269 Grass View MSA
121297649 5274 Embryophyte View MSA
123335684 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.101        
cufflinks 0.016     Low Low
cufflinks 0.066        
cufflinks 0.025     Low Low
cufflinks 0.108        
cufflinks 0.057     Low  
cufflinks 0.112        
cufflinks 0.059     Low  
cufflinks 0.089        
cufflinks 0.077        
cufflinks 2.563       High
cufflinks 1.171       High
cufflinks 0.08        
cufflinks 1.829       High
cufflinks 0.081     Low  
cufflinks 0.051     Low  
cufflinks 0.196        
cufflinks 0.035     Low  
cufflinks 0.046     Low  
cufflinks 0.058     Low  
cufflinks 0.23        
cufflinks 2.257       High
cufflinks 2.493       High
cufflinks 2.93       High
cufflinks 0.017     Low Low
cufflinks 0.012     Low Low
cufflinks 0.115        
cufflinks 0.943       High
cufflinks 0.035     Low  
cufflinks 0.071     Low  

0 Strain