Gene : Sobic.001G382600 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  4011
Name:  ? Sobic.001G382600 Secondary Identifier:  ? PAC:37938373
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G382600 0.5kb upstream 0.5kb upstream 5468 true Chr01: 67037354-67042821 Sorghum bicolor
Sobic.001G382600 0.5kb upstream 0.5kb upstream 500 false Chr01: 67037354-67037853 Sorghum bicolor
Sobic.001G382600 0.5kb downstream 0.5kb downstream 5468 true Chr01: 67037854-67043321 Sorghum bicolor
Sobic.001G382600 0.5kb downstream 0.5kb downstream 500 false Chr01: 67042822-67043321 Sorghum bicolor
Sobic.001G382600 1.0kb upstream 1.0kb upstream 5968 true Chr01: 67036854-67042821 Sorghum bicolor
Sobic.001G382600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 67036854-67037853 Sorghum bicolor
Sobic.001G382600 1.0kb downstream 1.0kb downstream 5968 true Chr01: 67037854-67043821 Sorghum bicolor
Sobic.001G382600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 67042822-67043821 Sorghum bicolor
Sobic.001G382600 2.0kb upstream 2.0kb upstream 6968 true Chr01: 67035854-67042821 Sorghum bicolor
Sobic.001G382600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 67035854-67037853 Sorghum bicolor
Sobic.001G382600 2.0kb downstream 2.0kb downstream 6968 true Chr01: 67037854-67044821 Sorghum bicolor
Sobic.001G382600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 67042822-67044821 Sorghum bicolor
Sobic.001G382600 5.0kb upstream 5.0kb upstream 9968 true Chr01: 67032854-67042821 Sorghum bicolor
Sobic.001G382600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 67032854-67037853 Sorghum bicolor
Sobic.001G382600 5.0kb downstream 5.0kb downstream 9968 true Chr01: 67037854-67047821 Sorghum bicolor
Sobic.001G382600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 67042822-67047821 Sorghum bicolor
Sobic.001G382600 10.0kb upstream 10.0kb upstream 14968 true Chr01: 67027854-67042821 Sorghum bicolor
Sobic.001G382600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 67027854-67037853 Sorghum bicolor
Sobic.001G382600 10.0kb downstream 10.0kb downstream 14968 true Chr01: 67037854-67052821 Sorghum bicolor
Sobic.001G382600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 67042822-67052821 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189610 5267 Panicoideae View MSA
124583925 5269 Grass View MSA
122046561 5273 Angiosperm View MSA
121310623 5274 Embryophyte View MSA
123348060 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.578        
cufflinks 1.197       Low
cufflinks 3.113        
cufflinks 4.397        
cufflinks 4.307        
cufflinks 4.944        
cufflinks 2.986        
cufflinks 1.755       Low
cufflinks 5.531       High
cufflinks 5.962       High
cufflinks 3.888        
cufflinks 4.136        
cufflinks 5.714       High
cufflinks 3.194        
cufflinks 5.013        
cufflinks 2.078       Low
cufflinks 3.158        
cufflinks 3.13        
cufflinks 2.021       Low
cufflinks 4.609        
cufflinks 5.25       High
cufflinks 3.823        
cufflinks 4.192        
cufflinks 3.764        
cufflinks 1.922       Low
cufflinks 1.418       Low
cufflinks 4.146        
cufflinks 1.58       Low
cufflinks 2.951        
cufflinks 4.479        

0 Strain