Gene : Sobic.001G380400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10994//PTHR10994:SF67 - RETICULON // RETICULON-LIKE PROTEIN B16 Genomic Order:  3987
Name:  ? Sobic.001G380400 Secondary Identifier:  ? PAC:37942050
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G380400 0.5kb upstream 0.5kb upstream 2781 true Chr01: 66843815-66846595 Sorghum bicolor
Sobic.001G380400 0.5kb upstream 0.5kb upstream 500 false Chr01: 66843815-66844314 Sorghum bicolor
Sobic.001G380400 0.5kb downstream 0.5kb downstream 2781 true Chr01: 66844315-66847095 Sorghum bicolor
Sobic.001G380400 0.5kb downstream 0.5kb downstream 500 false Chr01: 66846596-66847095 Sorghum bicolor
Sobic.001G380400 1.0kb upstream 1.0kb upstream 3281 true Chr01: 66843315-66846595 Sorghum bicolor
Sobic.001G380400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 66843315-66844314 Sorghum bicolor
Sobic.001G380400 1.0kb downstream 1.0kb downstream 3281 true Chr01: 66844315-66847595 Sorghum bicolor
Sobic.001G380400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 66846596-66847595 Sorghum bicolor
Sobic.001G380400 2.0kb upstream 2.0kb upstream 4281 true Chr01: 66842315-66846595 Sorghum bicolor
Sobic.001G380400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 66842315-66844314 Sorghum bicolor
Sobic.001G380400 2.0kb downstream 2.0kb downstream 4281 true Chr01: 66844315-66848595 Sorghum bicolor
Sobic.001G380400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 66846596-66848595 Sorghum bicolor
Sobic.001G380400 5.0kb upstream 5.0kb upstream 7281 true Chr01: 66839315-66846595 Sorghum bicolor
Sobic.001G380400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 66839315-66844314 Sorghum bicolor
Sobic.001G380400 5.0kb downstream 5.0kb downstream 7281 true Chr01: 66844315-66851595 Sorghum bicolor
Sobic.001G380400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 66846596-66851595 Sorghum bicolor
Sobic.001G380400 10.0kb upstream 10.0kb upstream 12281 true Chr01: 66834315-66846595 Sorghum bicolor
Sobic.001G380400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 66834315-66844314 Sorghum bicolor
Sobic.001G380400 10.0kb downstream 10.0kb downstream 12281 true Chr01: 66844315-66856595 Sorghum bicolor
Sobic.001G380400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 66846596-66856595 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187232 5267 Panicoideae View MSA
124569543 5269 Grass View MSA
122047418 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.27        
cufflinks 2.36       Low
cufflinks 13.361     High  
cufflinks 26.31     High High
cufflinks 9.12        
cufflinks 14.116     High  
cufflinks 2.535       Low
cufflinks 2.792       Low
cufflinks 9.273        
cufflinks 11.006        
cufflinks 14.481     High  
cufflinks 12.176     High  
cufflinks 12.747     High  
cufflinks 11.206        
cufflinks 9.403        
cufflinks 5.679        
cufflinks 2.898       Low
cufflinks 2.919       Low
cufflinks 11.78     High  
cufflinks 4.148        
cufflinks 1.835       Low
cufflinks 9.888        
cufflinks 9.838        
cufflinks 7.543        
cufflinks 4.502        
cufflinks 2.321       Low
cufflinks 20.031     High High
cufflinks 4.844        
cufflinks 2.573       Low
cufflinks 9.314        

0 Strain