Gene : Sobic.001G379900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR30540//PTHR30540:SF6 - OSMOTIC STRESS POTASSIUM TRANSPORTER // POTASSIUM TRANSPORTER 2 Genomic Order:  3982
Name:  ? Sobic.001G379900 Secondary Identifier:  ? PAC:37941233
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G379900 0.5kb upstream 0.5kb upstream 6852 true Chr01: 66813262-66820113 Sorghum bicolor
Sobic.001G379900 0.5kb upstream 0.5kb upstream 500 false Chr01: 66819614-66820113 Sorghum bicolor
Sobic.001G379900 0.5kb downstream 0.5kb downstream 6852 true Chr01: 66812762-66819613 Sorghum bicolor
Sobic.001G379900 0.5kb downstream 0.5kb downstream 500 false Chr01: 66812762-66813261 Sorghum bicolor
Sobic.001G379900 1.0kb upstream 1.0kb upstream 7352 true Chr01: 66813262-66820613 Sorghum bicolor
Sobic.001G379900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 66819614-66820613 Sorghum bicolor
Sobic.001G379900 1.0kb downstream 1.0kb downstream 7352 true Chr01: 66812262-66819613 Sorghum bicolor
Sobic.001G379900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 66812262-66813261 Sorghum bicolor
Sobic.001G379900 2.0kb upstream 2.0kb upstream 8352 true Chr01: 66813262-66821613 Sorghum bicolor
Sobic.001G379900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 66819614-66821613 Sorghum bicolor
Sobic.001G379900 2.0kb downstream 2.0kb downstream 8352 true Chr01: 66811262-66819613 Sorghum bicolor
Sobic.001G379900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 66811262-66813261 Sorghum bicolor
Sobic.001G379900 5.0kb upstream 5.0kb upstream 11352 true Chr01: 66813262-66824613 Sorghum bicolor
Sobic.001G379900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 66819614-66824613 Sorghum bicolor
Sobic.001G379900 5.0kb downstream 5.0kb downstream 11352 true Chr01: 66808262-66819613 Sorghum bicolor
Sobic.001G379900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 66808262-66813261 Sorghum bicolor
Sobic.001G379900 10.0kb upstream 10.0kb upstream 16352 true Chr01: 66813262-66829613 Sorghum bicolor
Sobic.001G379900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 66819614-66829613 Sorghum bicolor
Sobic.001G379900 10.0kb downstream 10.0kb downstream 16352 true Chr01: 66803262-66819613 Sorghum bicolor
Sobic.001G379900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 66803262-66813261 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195412 5267 Panicoideae View MSA
124573780 5269 Grass View MSA
122045012 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121310386 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.368       Low
cufflinks 0.518        
cufflinks 0.138       Low
cufflinks 0.089       Low
cufflinks 8.874       High
cufflinks 0.411       Low
cufflinks 3.556        
cufflinks 3.076        
cufflinks 0.236       Low
cufflinks 0.765        
cufflinks 1.649        
cufflinks 2.074        
cufflinks 1.175        
cufflinks 2.188        
cufflinks 5.346       High
cufflinks 0.15       Low
cufflinks 3.213        
cufflinks 3.291        
cufflinks 0.63        
cufflinks 2.774        
cufflinks 7.891       High
cufflinks 2.537        
cufflinks 2.36        
cufflinks 2.661        
cufflinks 0.556        
cufflinks 0.824        
cufflinks 3.632        
cufflinks 0.254       Low
cufflinks 2.521        
cufflinks 4.696        

0 Strain