Gene : Sobic.001G373000 S. bicolor v3.1.1
Defline:  (1 of 1) K14309 - nuclear pore complex protein Nup93 (NUP93, NIC96) Genomic Order:  3907
Name:  ? Sobic.001G373000 Secondary Identifier:  ? PAC:37943420
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G373000 0.5kb upstream 0.5kb upstream 8940 true Chr01: 66093994-66102933 Sorghum bicolor
Sobic.001G373000 0.5kb upstream 0.5kb upstream 500 false Chr01: 66093994-66094493 Sorghum bicolor
Sobic.001G373000 0.5kb downstream 0.5kb downstream 8940 true Chr01: 66094494-66103433 Sorghum bicolor
Sobic.001G373000 0.5kb downstream 0.5kb downstream 500 false Chr01: 66102934-66103433 Sorghum bicolor
Sobic.001G373000 1.0kb upstream 1.0kb upstream 9440 true Chr01: 66093494-66102933 Sorghum bicolor
Sobic.001G373000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 66093494-66094493 Sorghum bicolor
Sobic.001G373000 1.0kb downstream 1.0kb downstream 9440 true Chr01: 66094494-66103933 Sorghum bicolor
Sobic.001G373000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 66102934-66103933 Sorghum bicolor
Sobic.001G373000 2.0kb upstream 2.0kb upstream 10440 true Chr01: 66092494-66102933 Sorghum bicolor
Sobic.001G373000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 66092494-66094493 Sorghum bicolor
Sobic.001G373000 2.0kb downstream 2.0kb downstream 10440 true Chr01: 66094494-66104933 Sorghum bicolor
Sobic.001G373000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 66102934-66104933 Sorghum bicolor
Sobic.001G373000 5.0kb upstream 5.0kb upstream 13440 true Chr01: 66089494-66102933 Sorghum bicolor
Sobic.001G373000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 66089494-66094493 Sorghum bicolor
Sobic.001G373000 5.0kb downstream 5.0kb downstream 13440 true Chr01: 66094494-66107933 Sorghum bicolor
Sobic.001G373000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 66102934-66107933 Sorghum bicolor
Sobic.001G373000 10.0kb upstream 10.0kb upstream 18440 true Chr01: 66084494-66102933 Sorghum bicolor
Sobic.001G373000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 66084494-66094493 Sorghum bicolor
Sobic.001G373000 10.0kb downstream 10.0kb downstream 18440 true Chr01: 66094494-66112933 Sorghum bicolor
Sobic.001G373000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 66102934-66112933 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196299 5267 Panicoideae View MSA
124574172 5269 Grass View MSA
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.774     High  
cufflinks 0.671       Low
cufflinks 1.635       Low
cufflinks 4.168        
cufflinks 11.936        
cufflinks 3.216        
cufflinks 6.634        
cufflinks 1.446       Low
cufflinks 8.798        
cufflinks 10.794        
cufflinks 8.578        
cufflinks 9.307        
cufflinks 6.772        
cufflinks 9.345        
cufflinks 6.34        
cufflinks 1.566       Low
cufflinks 6.693        
cufflinks 7.501        
cufflinks 1.717       Low
cufflinks 6.188        
cufflinks 15.432     High High
cufflinks 10.179        
cufflinks 10.035        
cufflinks 10.715        
cufflinks 1.175       Low
cufflinks 0.765       Low
cufflinks 7.115        
cufflinks 9.17        
cufflinks 4.597        
cufflinks 11.108        

0 Strain