Gene : Sobic.001G375300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12606//PTHR12606:SF23 - SENTRIN/SUMO-SPECIFIC PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  3931
Name:  ? Sobic.001G375300 Secondary Identifier:  ? PAC:37944459
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G375300 0.5kb upstream 0.5kb upstream 6620 true Chr01: 66381315-66387934 Sorghum bicolor
Sobic.001G375300 0.5kb upstream 0.5kb upstream 500 false Chr01: 66381315-66381814 Sorghum bicolor
Sobic.001G375300 0.5kb downstream 0.5kb downstream 6620 true Chr01: 66381815-66388434 Sorghum bicolor
Sobic.001G375300 0.5kb downstream 0.5kb downstream 500 false Chr01: 66387935-66388434 Sorghum bicolor
Sobic.001G375300 1.0kb upstream 1.0kb upstream 7120 true Chr01: 66380815-66387934 Sorghum bicolor
Sobic.001G375300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 66380815-66381814 Sorghum bicolor
Sobic.001G375300 1.0kb downstream 1.0kb downstream 7120 true Chr01: 66381815-66388934 Sorghum bicolor
Sobic.001G375300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 66387935-66388934 Sorghum bicolor
Sobic.001G375300 2.0kb upstream 2.0kb upstream 8120 true Chr01: 66379815-66387934 Sorghum bicolor
Sobic.001G375300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 66379815-66381814 Sorghum bicolor
Sobic.001G375300 2.0kb downstream 2.0kb downstream 8120 true Chr01: 66381815-66389934 Sorghum bicolor
Sobic.001G375300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 66387935-66389934 Sorghum bicolor
Sobic.001G375300 5.0kb upstream 5.0kb upstream 11120 true Chr01: 66376815-66387934 Sorghum bicolor
Sobic.001G375300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 66376815-66381814 Sorghum bicolor
Sobic.001G375300 5.0kb downstream 5.0kb downstream 11120 true Chr01: 66381815-66392934 Sorghum bicolor
Sobic.001G375300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 66387935-66392934 Sorghum bicolor
Sobic.001G375300 10.0kb upstream 10.0kb upstream 16120 true Chr01: 66371815-66387934 Sorghum bicolor
Sobic.001G375300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 66371815-66381814 Sorghum bicolor
Sobic.001G375300 10.0kb downstream 10.0kb downstream 16120 true Chr01: 66381815-66397934 Sorghum bicolor
Sobic.001G375300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 66387935-66397934 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184403 5267 Panicoideae View MSA
124582593 5269 Grass View MSA
122046617 5273 Angiosperm View MSA
121348677 5274 Embryophyte View MSA
123380965 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.488        
cufflinks 1.005       Low
cufflinks 1.916        
cufflinks 3.79        
cufflinks 4.288       High
cufflinks 4.124       High
cufflinks 2.151        
cufflinks 1.366       Low
cufflinks 4.845       High
cufflinks 5.494       High
cufflinks 2.387        
cufflinks 2.501        
cufflinks 3.72        
cufflinks 2.057        
cufflinks 3.011        
cufflinks 1.826        
cufflinks 2.395        
cufflinks 2.675        
cufflinks 2.052        
cufflinks 3.284        
cufflinks 4.411       High
cufflinks 2.361        
cufflinks 2.445        
cufflinks 1.991        
cufflinks 1.764        
cufflinks 1.062       Low
cufflinks 2.546        
cufflinks 3.311        
cufflinks 2.185        
cufflinks 4.081       High

0 Strain