Gene : Sobic.001G370700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR20863//PTHR20863:SF37 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3882
Name:  ? Sobic.001G370700 Secondary Identifier:  ? PAC:37937754
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G370700 0.5kb upstream 0.5kb upstream 4481 true Chr01: 65913723-65918203 Sorghum bicolor
Sobic.001G370700 0.5kb upstream 0.5kb upstream 500 false Chr01: 65913723-65914222 Sorghum bicolor
Sobic.001G370700 0.5kb downstream 0.5kb downstream 4481 true Chr01: 65914223-65918703 Sorghum bicolor
Sobic.001G370700 0.5kb downstream 0.5kb downstream 500 false Chr01: 65918204-65918703 Sorghum bicolor
Sobic.001G370700 1.0kb upstream 1.0kb upstream 4981 true Chr01: 65913223-65918203 Sorghum bicolor
Sobic.001G370700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 65913223-65914222 Sorghum bicolor
Sobic.001G370700 1.0kb downstream 1.0kb downstream 4981 true Chr01: 65914223-65919203 Sorghum bicolor
Sobic.001G370700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 65918204-65919203 Sorghum bicolor
Sobic.001G370700 2.0kb upstream 2.0kb upstream 5981 true Chr01: 65912223-65918203 Sorghum bicolor
Sobic.001G370700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 65912223-65914222 Sorghum bicolor
Sobic.001G370700 2.0kb downstream 2.0kb downstream 5981 true Chr01: 65914223-65920203 Sorghum bicolor
Sobic.001G370700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 65918204-65920203 Sorghum bicolor
Sobic.001G370700 5.0kb upstream 5.0kb upstream 8981 true Chr01: 65909223-65918203 Sorghum bicolor
Sobic.001G370700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 65909223-65914222 Sorghum bicolor
Sobic.001G370700 5.0kb downstream 5.0kb downstream 8981 true Chr01: 65914223-65923203 Sorghum bicolor
Sobic.001G370700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 65918204-65923203 Sorghum bicolor
Sobic.001G370700 10.0kb upstream 10.0kb upstream 13981 true Chr01: 65904223-65918203 Sorghum bicolor
Sobic.001G370700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 65904223-65914222 Sorghum bicolor
Sobic.001G370700 10.0kb downstream 10.0kb downstream 13981 true Chr01: 65914223-65928203 Sorghum bicolor
Sobic.001G370700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 65918204-65928203 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175657 5267 Panicoideae View MSA
124585029 5269 Grass View MSA
122046821 5273 Angiosperm View MSA
121348807 5274 Embryophyte View MSA
123423791 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.303     High High
cufflinks 0.517       Low
cufflinks 0.964       Low
cufflinks 1.436        
cufflinks 3.61        
cufflinks 2.015        
cufflinks 2.71        
cufflinks 0.873       Low
cufflinks 1.718        
cufflinks 2.192        
cufflinks 5.45        
cufflinks 2.829        
cufflinks 1.442        
cufflinks 4.438        
cufflinks 2.565        
cufflinks 0.729       Low
cufflinks 2.753        
cufflinks 2.876        
cufflinks 1.129        
cufflinks 2.402        
cufflinks 2.78        
cufflinks 9.605       High
cufflinks 5.738        
cufflinks 5.712        
cufflinks 0.445       Low
cufflinks 0.321       Low
cufflinks 2.045        
cufflinks 3.829        
cufflinks 2.697        
cufflinks 4.131        

0 Strain