Gene : Sobic.005G175000 S. bicolor v3.1.1
Defline:  (1 of 1) KOG0406//KOG0867 - Glutathione S-transferase // Glutathione S-transferase Genomic Order:  1849
Name:  ? Sobic.005G175000 Secondary Identifier:  ? PAC:37924211
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6842 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G175000 0.5kb upstream 0.5kb upstream 4180 true Chr05: 65509090-65513269 Sorghum bicolor
Sobic.005G175000 0.5kb upstream 0.5kb upstream 500 false Chr05: 65509090-65509589 Sorghum bicolor
Sobic.005G175000 0.5kb downstream 0.5kb downstream 4180 true Chr05: 65509590-65513769 Sorghum bicolor
Sobic.005G175000 0.5kb downstream 0.5kb downstream 500 false Chr05: 65513270-65513769 Sorghum bicolor
Sobic.005G175000 1.0kb upstream 1.0kb upstream 4680 true Chr05: 65508590-65513269 Sorghum bicolor
Sobic.005G175000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 65508590-65509589 Sorghum bicolor
Sobic.005G175000 1.0kb downstream 1.0kb downstream 4680 true Chr05: 65509590-65514269 Sorghum bicolor
Sobic.005G175000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 65513270-65514269 Sorghum bicolor
Sobic.005G175000 2.0kb upstream 2.0kb upstream 5680 true Chr05: 65507590-65513269 Sorghum bicolor
Sobic.005G175000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 65507590-65509589 Sorghum bicolor
Sobic.005G175000 2.0kb downstream 2.0kb downstream 5680 true Chr05: 65509590-65515269 Sorghum bicolor
Sobic.005G175000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 65513270-65515269 Sorghum bicolor
Sobic.005G175000 5.0kb upstream 5.0kb upstream 8680 true Chr05: 65504590-65513269 Sorghum bicolor
Sobic.005G175000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 65504590-65509589 Sorghum bicolor
Sobic.005G175000 5.0kb downstream 5.0kb downstream 8680 true Chr05: 65509590-65518269 Sorghum bicolor
Sobic.005G175000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 65513270-65518269 Sorghum bicolor
Sobic.005G175000 10.0kb upstream 10.0kb upstream 13680 true Chr05: 65499590-65513269 Sorghum bicolor
Sobic.005G175000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 65499590-65509589 Sorghum bicolor
Sobic.005G175000 10.0kb downstream 10.0kb downstream 13680 true Chr05: 65509590-65523269 Sorghum bicolor
Sobic.005G175000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 65513270-65523269 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122173178 5267 Panicoideae View MSA
124585704 5269 Grass View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.689        
cufflinks 0.414       Low
cufflinks 0.538       Low
cufflinks 1.239       High
cufflinks 0.74        
cufflinks 0.812        
cufflinks 0.685        
cufflinks 0.619        
cufflinks 0.646        
cufflinks 0.775        
cufflinks 0.827        
cufflinks 1.309       High
cufflinks 0.978        
cufflinks 1.162       High
cufflinks 1.129       High
cufflinks 0.773        
cufflinks 0.772        
cufflinks 0.724        
cufflinks 0.393       Low
cufflinks 0.857        
cufflinks 2.069       High
cufflinks 0.874        
cufflinks 0.927        
cufflinks 0.942        
cufflinks 0.453       Low
cufflinks 0.398       Low
cufflinks 0.924        
cufflinks 0.434       Low
cufflinks 0.752        
cufflinks 1.385       High

0 Strain