Gene : Sobic.001G371100 S. bicolor v3.1.1
Defline:  (1 of 2) K14564 - nucleolar protein 56 (NOP56) Genomic Order:  3887
Name:  ? Sobic.001G371100 Secondary Identifier:  ? PAC:37944384
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G371100 0.5kb upstream 0.5kb upstream 3772 true Chr01: 65947213-65950984 Sorghum bicolor
Sobic.001G371100 0.5kb upstream 0.5kb upstream 500 false Chr01: 65947213-65947712 Sorghum bicolor
Sobic.001G371100 0.5kb downstream 0.5kb downstream 3772 true Chr01: 65947713-65951484 Sorghum bicolor
Sobic.001G371100 0.5kb downstream 0.5kb downstream 500 false Chr01: 65950985-65951484 Sorghum bicolor
Sobic.001G371100 1.0kb upstream 1.0kb upstream 4272 true Chr01: 65946713-65950984 Sorghum bicolor
Sobic.001G371100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 65946713-65947712 Sorghum bicolor
Sobic.001G371100 1.0kb downstream 1.0kb downstream 4272 true Chr01: 65947713-65951984 Sorghum bicolor
Sobic.001G371100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 65950985-65951984 Sorghum bicolor
Sobic.001G371100 2.0kb upstream 2.0kb upstream 5272 true Chr01: 65945713-65950984 Sorghum bicolor
Sobic.001G371100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 65945713-65947712 Sorghum bicolor
Sobic.001G371100 2.0kb downstream 2.0kb downstream 5272 true Chr01: 65947713-65952984 Sorghum bicolor
Sobic.001G371100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 65950985-65952984 Sorghum bicolor
Sobic.001G371100 5.0kb upstream 5.0kb upstream 8272 true Chr01: 65942713-65950984 Sorghum bicolor
Sobic.001G371100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 65942713-65947712 Sorghum bicolor
Sobic.001G371100 5.0kb downstream 5.0kb downstream 8272 true Chr01: 65947713-65955984 Sorghum bicolor
Sobic.001G371100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 65950985-65955984 Sorghum bicolor
Sobic.001G371100 10.0kb upstream 10.0kb upstream 13272 true Chr01: 65937713-65950984 Sorghum bicolor
Sobic.001G371100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 65937713-65947712 Sorghum bicolor
Sobic.001G371100 10.0kb downstream 10.0kb downstream 13272 true Chr01: 65947713-65960984 Sorghum bicolor
Sobic.001G371100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 65950985-65960984 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191312 5267 Panicoideae View MSA
124589600 5269 Grass View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 126.459     High High
cufflinks 1.28       Low
cufflinks 6.325       Low
cufflinks 16.668     High  
cufflinks 67.826     High  
cufflinks 12.955        
cufflinks 34.408     High  
cufflinks 2.834       Low
cufflinks 47.559     High  
cufflinks 47.087     High  
cufflinks 81.668     High  
cufflinks 55.825     High  
cufflinks 21.099     High  
cufflinks 68.258     High  
cufflinks 25.462     High  
cufflinks 4.428       Low
cufflinks 37.202     High  
cufflinks 39.555     High  
cufflinks 6.569       Low
cufflinks 27.122     High  
cufflinks 140.926     High High
cufflinks 95.781     High  
cufflinks 83.19     High  
cufflinks 92.447     High  
cufflinks 2.346       Low
cufflinks 0.971       Low
cufflinks 37.905     High  
cufflinks 37.525     High  
cufflinks 14.967     High  
cufflinks 56.484     High  

0 Strain