Gene : Sobic.001G365600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12277:SF51 - ALPHA/BETA HYDROLASE FOLD-1 DOMAIN-CONTAINING PROTEIN Genomic Order:  3833
Name:  ? Sobic.001G365600 Secondary Identifier:  ? PAC:37944903
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor LIPAS-PWY Sorghum bicolor pathologic  
Sbicolor PWY-7420 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G365600 0.5kb upstream 0.5kb upstream 10092 true Chr01: 65413969-65424060 Sorghum bicolor
Sobic.001G365600 0.5kb upstream 0.5kb upstream 500 false Chr01: 65413969-65414468 Sorghum bicolor
Sobic.001G365600 0.5kb downstream 0.5kb downstream 10092 true Chr01: 65414469-65424560 Sorghum bicolor
Sobic.001G365600 0.5kb downstream 0.5kb downstream 500 false Chr01: 65424061-65424560 Sorghum bicolor
Sobic.001G365600 1.0kb upstream 1.0kb upstream 10592 true Chr01: 65413469-65424060 Sorghum bicolor
Sobic.001G365600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 65413469-65414468 Sorghum bicolor
Sobic.001G365600 1.0kb downstream 1.0kb downstream 10592 true Chr01: 65414469-65425060 Sorghum bicolor
Sobic.001G365600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 65424061-65425060 Sorghum bicolor
Sobic.001G365600 2.0kb upstream 2.0kb upstream 11592 true Chr01: 65412469-65424060 Sorghum bicolor
Sobic.001G365600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 65412469-65414468 Sorghum bicolor
Sobic.001G365600 2.0kb downstream 2.0kb downstream 11592 true Chr01: 65414469-65426060 Sorghum bicolor
Sobic.001G365600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 65424061-65426060 Sorghum bicolor
Sobic.001G365600 5.0kb upstream 5.0kb upstream 14592 true Chr01: 65409469-65424060 Sorghum bicolor
Sobic.001G365600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 65409469-65414468 Sorghum bicolor
Sobic.001G365600 5.0kb downstream 5.0kb downstream 14592 true Chr01: 65414469-65429060 Sorghum bicolor
Sobic.001G365600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 65424061-65429060 Sorghum bicolor
Sobic.001G365600 10.0kb upstream 10.0kb upstream 19592 true Chr01: 65404469-65424060 Sorghum bicolor
Sobic.001G365600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 65404469-65414468 Sorghum bicolor
Sobic.001G365600 10.0kb downstream 10.0kb downstream 19592 true Chr01: 65414469-65434060 Sorghum bicolor
Sobic.001G365600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 65424061-65434060 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175323 5267 Panicoideae View MSA
124575642 5269 Grass View MSA
122047952 5273 Angiosperm View MSA
121347410 5274 Embryophyte View MSA
123427961 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.653       Low
cufflinks 1.846       Low
cufflinks 2.719       Low
cufflinks 4.111        
cufflinks 4.869        
cufflinks 5.339        
cufflinks 3.787        
cufflinks 2.913       Low
cufflinks 8.161        
cufflinks 8.775       High
cufflinks 9.621       High
cufflinks 10.303       High
cufflinks 7.165        
cufflinks 8.09        
cufflinks 6.401        
cufflinks 3.175       Low
cufflinks 4.044        
cufflinks 4.005        
cufflinks 3.264        
cufflinks 6.116        
cufflinks 5.116        
cufflinks 8.321       High
cufflinks 8.865       High
cufflinks 8.767       High
cufflinks 2.601       Low
cufflinks 1.659       Low
cufflinks 7.02        
cufflinks 7.565        
cufflinks 4.318        
cufflinks 5.834        

0 Strain