Gene : Sobic.001G364100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13068//PTHR13068:SF22 - CGI-12 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3817
Name:  ? Sobic.001G364100 Secondary Identifier:  ? PAC:37941446
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G364100 0.5kb upstream 0.5kb upstream 1442 true Chr01: 65322668-65324109 Sorghum bicolor
Sobic.001G364100 0.5kb upstream 0.5kb upstream 500 false Chr01: 65323610-65324109 Sorghum bicolor
Sobic.001G364100 0.5kb downstream 0.5kb downstream 1442 true Chr01: 65322168-65323609 Sorghum bicolor
Sobic.001G364100 0.5kb downstream 0.5kb downstream 500 false Chr01: 65322168-65322667 Sorghum bicolor
Sobic.001G364100 1.0kb upstream 1.0kb upstream 1942 true Chr01: 65322668-65324609 Sorghum bicolor
Sobic.001G364100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 65323610-65324609 Sorghum bicolor
Sobic.001G364100 1.0kb downstream 1.0kb downstream 1942 true Chr01: 65321668-65323609 Sorghum bicolor
Sobic.001G364100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 65321668-65322667 Sorghum bicolor
Sobic.001G364100 2.0kb upstream 2.0kb upstream 2942 true Chr01: 65322668-65325609 Sorghum bicolor
Sobic.001G364100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 65323610-65325609 Sorghum bicolor
Sobic.001G364100 2.0kb downstream 2.0kb downstream 2942 true Chr01: 65320668-65323609 Sorghum bicolor
Sobic.001G364100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 65320668-65322667 Sorghum bicolor
Sobic.001G364100 5.0kb upstream 5.0kb upstream 5942 true Chr01: 65322668-65328609 Sorghum bicolor
Sobic.001G364100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 65323610-65328609 Sorghum bicolor
Sobic.001G364100 5.0kb downstream 5.0kb downstream 5942 true Chr01: 65317668-65323609 Sorghum bicolor
Sobic.001G364100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 65317668-65322667 Sorghum bicolor
Sobic.001G364100 10.0kb upstream 10.0kb upstream 10942 true Chr01: 65322668-65333609 Sorghum bicolor
Sobic.001G364100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 65323610-65333609 Sorghum bicolor
Sobic.001G364100 10.0kb downstream 10.0kb downstream 10942 true Chr01: 65312668-65323609 Sorghum bicolor
Sobic.001G364100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 65312668-65322667 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196439 5267 Panicoideae View MSA
124576776 5269 Grass View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.315     High High
cufflinks 1.312        
cufflinks 0.665        
cufflinks 0.182        
cufflinks 1.517        
cufflinks 3.523       High
cufflinks 11.845     High High
cufflinks 0.037     Low Low
cufflinks 0.013     Low Low
cufflinks 0.035     Low Low
cufflinks 0.02     Low Low
cufflinks 0.08        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.255        
cufflinks 6.497       High
cufflinks 5.029       High
cufflinks 3.308        
cufflinks 4.633       High
cufflinks 2.996        
cufflinks 0.06     Low  
cufflinks 0.048     Low  
cufflinks 0.016     Low Low
cufflinks 0.032     Low Low
cufflinks 6.757       High
cufflinks 10.529     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.422        
cufflinks 2.86        
cufflinks 0.72        

0 Strain