Gene : Sobic.001G485100 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  5090
Name:  ? Sobic.001G485100 Secondary Identifier:  ? PAC:37943804
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G485100 0.5kb upstream 0.5kb upstream 2617 true Chr01: 75578188-75580804 Sorghum bicolor
Sobic.001G485100 0.5kb upstream 0.5kb upstream 500 false Chr01: 75578188-75578687 Sorghum bicolor
Sobic.001G485100 0.5kb downstream 0.5kb downstream 2617 true Chr01: 75578688-75581304 Sorghum bicolor
Sobic.001G485100 0.5kb downstream 0.5kb downstream 500 false Chr01: 75580805-75581304 Sorghum bicolor
Sobic.001G485100 1.0kb upstream 1.0kb upstream 3117 true Chr01: 75577688-75580804 Sorghum bicolor
Sobic.001G485100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 75577688-75578687 Sorghum bicolor
Sobic.001G485100 1.0kb downstream 1.0kb downstream 3117 true Chr01: 75578688-75581804 Sorghum bicolor
Sobic.001G485100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 75580805-75581804 Sorghum bicolor
Sobic.001G485100 2.0kb upstream 2.0kb upstream 4117 true Chr01: 75576688-75580804 Sorghum bicolor
Sobic.001G485100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 75576688-75578687 Sorghum bicolor
Sobic.001G485100 2.0kb downstream 2.0kb downstream 4117 true Chr01: 75578688-75582804 Sorghum bicolor
Sobic.001G485100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 75580805-75582804 Sorghum bicolor
Sobic.001G485100 5.0kb upstream 5.0kb upstream 7117 true Chr01: 75573688-75580804 Sorghum bicolor
Sobic.001G485100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 75573688-75578687 Sorghum bicolor
Sobic.001G485100 5.0kb downstream 5.0kb downstream 7117 true Chr01: 75578688-75585804 Sorghum bicolor
Sobic.001G485100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 75580805-75585804 Sorghum bicolor
Sobic.001G485100 10.0kb upstream 10.0kb upstream 12117 true Chr01: 75568688-75580804 Sorghum bicolor
Sobic.001G485100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 75568688-75578687 Sorghum bicolor
Sobic.001G485100 10.0kb downstream 10.0kb downstream 12117 true Chr01: 75578688-75590804 Sorghum bicolor
Sobic.001G485100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 75580805-75590804 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175659 5267 Panicoideae View MSA
124584002 5269 Grass View MSA
122049393 5273 Angiosperm View MSA
121345648 5274 Embryophyte View MSA
123425550 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.381        
cufflinks 98.668     High High
cufflinks 55.993     High High
cufflinks 19.013     High  
cufflinks 4.713        
cufflinks 38.548     High  
cufflinks 35.529     High  
cufflinks 45.115     High High
cufflinks 1.291        
cufflinks 1.548        
cufflinks 0.079     Low Low
cufflinks 0.109     Low Low
cufflinks 5.264        
cufflinks 0.093     Low Low
cufflinks 24.699     High  
cufflinks 51.372     High High
cufflinks 28.518     High  
cufflinks 36.687     High  
cufflinks 36.988     High  
cufflinks 20.195     High  
cufflinks 1.562        
cufflinks 0.142       Low
cufflinks 0.064     Low Low
cufflinks 0.101       Low
cufflinks 47.611     High High
cufflinks 77.312     High High
cufflinks 0.269       Low
cufflinks 2.86        
cufflinks 26.384     High  
cufflinks 17.843     High  

0 Strain