Gene : Sobic.005G106700 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR16092 - SEC3/SYNTAXIN-RELATED Genomic Order:  1101
Name:  ? Sobic.005G106700 Secondary Identifier:  ? PAC:37925887
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G106700 0.5kb upstream 0.5kb upstream 21958 true Chr05: 20065102-20087059 Sorghum bicolor
Sobic.005G106700 0.5kb upstream 0.5kb upstream 500 false Chr05: 20065102-20065601 Sorghum bicolor
Sobic.005G106700 0.5kb downstream 0.5kb downstream 21958 true Chr05: 20065602-20087559 Sorghum bicolor
Sobic.005G106700 0.5kb downstream 0.5kb downstream 500 false Chr05: 20087060-20087559 Sorghum bicolor
Sobic.005G106700 1.0kb upstream 1.0kb upstream 22458 true Chr05: 20064602-20087059 Sorghum bicolor
Sobic.005G106700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 20064602-20065601 Sorghum bicolor
Sobic.005G106700 1.0kb downstream 1.0kb downstream 22458 true Chr05: 20065602-20088059 Sorghum bicolor
Sobic.005G106700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 20087060-20088059 Sorghum bicolor
Sobic.005G106700 2.0kb upstream 2.0kb upstream 23458 true Chr05: 20063602-20087059 Sorghum bicolor
Sobic.005G106700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 20063602-20065601 Sorghum bicolor
Sobic.005G106700 2.0kb downstream 2.0kb downstream 23458 true Chr05: 20065602-20089059 Sorghum bicolor
Sobic.005G106700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 20087060-20089059 Sorghum bicolor
Sobic.005G106700 5.0kb upstream 5.0kb upstream 26458 true Chr05: 20060602-20087059 Sorghum bicolor
Sobic.005G106700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 20060602-20065601 Sorghum bicolor
Sobic.005G106700 5.0kb downstream 5.0kb downstream 26458 true Chr05: 20065602-20092059 Sorghum bicolor
Sobic.005G106700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 20087060-20092059 Sorghum bicolor
Sobic.005G106700 10.0kb upstream 10.0kb upstream 31458 true Chr05: 20055602-20087059 Sorghum bicolor
Sobic.005G106700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 20055602-20065601 Sorghum bicolor
Sobic.005G106700 10.0kb downstream 10.0kb downstream 31458 true Chr05: 20065602-20097059 Sorghum bicolor
Sobic.005G106700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 20087060-20097059 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184393 5267 Panicoideae View MSA
124570633 5269 Grass View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.001     Low Low
cufflinks 0.058     Low High
cufflinks 0.003     Low  
cufflinks 0.012     Low  
cufflinks 0.001     Low Low
cufflinks 0.004     Low  
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.011     Low  
cufflinks 0.008     Low  
cufflinks 0.01     Low  
cufflinks 0.155       High
cufflinks 0.001     Low Low
cufflinks 0.01     Low  
cufflinks 0.014     Low  
cufflinks 0.001     Low Low
cufflinks 0.012     Low  
cufflinks 0.011     Low  
cufflinks 0.017     Low  
cufflinks 0.011     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.004     Low  
cufflinks 0.006     Low  
cufflinks 0.045     Low High

0 Strain