Gene : Sobic.001G484900 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  5088
Name:  ? Sobic.001G484900 Secondary Identifier:  ? PAC:37940230
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G484900 0.5kb upstream 0.5kb upstream 1750 true Chr01: 75563762-75565511 Sorghum bicolor
Sobic.001G484900 0.5kb upstream 0.5kb upstream 500 false Chr01: 75563762-75564261 Sorghum bicolor
Sobic.001G484900 0.5kb downstream 0.5kb downstream 1750 true Chr01: 75564262-75566011 Sorghum bicolor
Sobic.001G484900 0.5kb downstream 0.5kb downstream 500 false Chr01: 75565512-75566011 Sorghum bicolor
Sobic.001G484900 1.0kb upstream 1.0kb upstream 2250 true Chr01: 75563262-75565511 Sorghum bicolor
Sobic.001G484900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 75563262-75564261 Sorghum bicolor
Sobic.001G484900 1.0kb downstream 1.0kb downstream 2250 true Chr01: 75564262-75566511 Sorghum bicolor
Sobic.001G484900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 75565512-75566511 Sorghum bicolor
Sobic.001G484900 2.0kb upstream 2.0kb upstream 3250 true Chr01: 75562262-75565511 Sorghum bicolor
Sobic.001G484900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 75562262-75564261 Sorghum bicolor
Sobic.001G484900 2.0kb downstream 2.0kb downstream 3250 true Chr01: 75564262-75567511 Sorghum bicolor
Sobic.001G484900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 75565512-75567511 Sorghum bicolor
Sobic.001G484900 5.0kb upstream 5.0kb upstream 6250 true Chr01: 75559262-75565511 Sorghum bicolor
Sobic.001G484900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 75559262-75564261 Sorghum bicolor
Sobic.001G484900 5.0kb downstream 5.0kb downstream 6250 true Chr01: 75564262-75570511 Sorghum bicolor
Sobic.001G484900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 75565512-75570511 Sorghum bicolor
Sobic.001G484900 10.0kb upstream 10.0kb upstream 11250 true Chr01: 75554262-75565511 Sorghum bicolor
Sobic.001G484900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 75554262-75564261 Sorghum bicolor
Sobic.001G484900 10.0kb downstream 10.0kb downstream 11250 true Chr01: 75564262-75575511 Sorghum bicolor
Sobic.001G484900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 75565512-75575511 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181509 5267 Panicoideae View MSA
124584002 5269 Grass View MSA
122049393 5273 Angiosperm View MSA
121345648 5274 Embryophyte View MSA
123425550 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.985        
cufflinks 5.044       High
cufflinks 2.008        
cufflinks 3.859        
cufflinks 0.455       Low
cufflinks 4.9       High
cufflinks 4.379        
cufflinks 5.364       High
cufflinks 2.704        
cufflinks 5.561       High
cufflinks 0.608        
cufflinks 2.044        
cufflinks 2.798        
cufflinks 1.165        
cufflinks 1.351        
cufflinks 3.71        
cufflinks 4.785       High
cufflinks 4.614        
cufflinks 1.868        
cufflinks 3.994        
cufflinks 0.062     Low Low
cufflinks 1.171        
cufflinks 0.984        
cufflinks 0.809        
cufflinks 3.717        
cufflinks 5.61       High
cufflinks 0.275       Low
cufflinks 0.127       Low
cufflinks 4.312        
cufflinks 0.602        

0 Strain