Gene : Sobic.001G474700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12459:SF6 - TRANSMEMBRANE PROTEIN Genomic Order:  4986
Name:  ? Sobic.001G474700 Secondary Identifier:  ? PAC:37942511
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G474700 0.5kb upstream 0.5kb upstream 4647 true Chr01: 74685781-74690427 Sorghum bicolor
Sobic.001G474700 0.5kb upstream 0.5kb upstream 500 false Chr01: 74685781-74686280 Sorghum bicolor
Sobic.001G474700 0.5kb downstream 0.5kb downstream 4647 true Chr01: 74686281-74690927 Sorghum bicolor
Sobic.001G474700 0.5kb downstream 0.5kb downstream 500 false Chr01: 74690428-74690927 Sorghum bicolor
Sobic.001G474700 1.0kb upstream 1.0kb upstream 5147 true Chr01: 74685281-74690427 Sorghum bicolor
Sobic.001G474700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 74685281-74686280 Sorghum bicolor
Sobic.001G474700 1.0kb downstream 1.0kb downstream 5147 true Chr01: 74686281-74691427 Sorghum bicolor
Sobic.001G474700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 74690428-74691427 Sorghum bicolor
Sobic.001G474700 2.0kb upstream 2.0kb upstream 6147 true Chr01: 74684281-74690427 Sorghum bicolor
Sobic.001G474700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 74684281-74686280 Sorghum bicolor
Sobic.001G474700 2.0kb downstream 2.0kb downstream 6147 true Chr01: 74686281-74692427 Sorghum bicolor
Sobic.001G474700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 74690428-74692427 Sorghum bicolor
Sobic.001G474700 5.0kb upstream 5.0kb upstream 9147 true Chr01: 74681281-74690427 Sorghum bicolor
Sobic.001G474700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 74681281-74686280 Sorghum bicolor
Sobic.001G474700 5.0kb downstream 5.0kb downstream 9147 true Chr01: 74686281-74695427 Sorghum bicolor
Sobic.001G474700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 74690428-74695427 Sorghum bicolor
Sobic.001G474700 10.0kb upstream 10.0kb upstream 14147 true Chr01: 74676281-74690427 Sorghum bicolor
Sobic.001G474700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 74676281-74686280 Sorghum bicolor
Sobic.001G474700 10.0kb downstream 10.0kb downstream 14147 true Chr01: 74686281-74700427 Sorghum bicolor
Sobic.001G474700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 74690428-74700427 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178890 5267 Panicoideae View MSA
124570345 5269 Grass View MSA
122042265 5273 Angiosperm View MSA
121346906 5274 Embryophyte View MSA
123424651 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.385        
cufflinks 1.907       Low
cufflinks 7.233        
cufflinks 13.499     High High
cufflinks 9.148        
cufflinks 13.438       High
cufflinks 5.695        
cufflinks 3.987       Low
cufflinks 13.523     High High
cufflinks 9.852        
cufflinks 5.511        
cufflinks 6.964        
cufflinks 10.97        
cufflinks 5.419        
cufflinks 15.007     High High
cufflinks 4.031       Low
cufflinks 6.196        
cufflinks 5.56        
cufflinks 4.121       Low
cufflinks 10.713        
cufflinks 9.906        
cufflinks 4.784        
cufflinks 6.122        
cufflinks 5.668        
cufflinks 6.396        
cufflinks 2.599       Low
cufflinks 9.027        
cufflinks 10.51     High  
cufflinks 4.744        
cufflinks 11.59       High

0 Strain