Gene : Sobic.001G473800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR30007//PTHR30007:SF19 - PHP DOMAIN PROTEIN // EXPRESSED PROTEIN Genomic Order:  4977
Name:  ? Sobic.001G473800 Secondary Identifier:  ? PAC:37941351
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G473800 0.5kb upstream 0.5kb upstream 3415 true Chr01: 74594365-74597779 Sorghum bicolor
Sobic.001G473800 0.5kb upstream 0.5kb upstream 500 false Chr01: 74594365-74594864 Sorghum bicolor
Sobic.001G473800 0.5kb downstream 0.5kb downstream 3415 true Chr01: 74594865-74598279 Sorghum bicolor
Sobic.001G473800 0.5kb downstream 0.5kb downstream 500 false Chr01: 74597780-74598279 Sorghum bicolor
Sobic.001G473800 1.0kb upstream 1.0kb upstream 3915 true Chr01: 74593865-74597779 Sorghum bicolor
Sobic.001G473800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 74593865-74594864 Sorghum bicolor
Sobic.001G473800 1.0kb downstream 1.0kb downstream 3915 true Chr01: 74594865-74598779 Sorghum bicolor
Sobic.001G473800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 74597780-74598779 Sorghum bicolor
Sobic.001G473800 2.0kb upstream 2.0kb upstream 4915 true Chr01: 74592865-74597779 Sorghum bicolor
Sobic.001G473800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 74592865-74594864 Sorghum bicolor
Sobic.001G473800 2.0kb downstream 2.0kb downstream 4915 true Chr01: 74594865-74599779 Sorghum bicolor
Sobic.001G473800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 74597780-74599779 Sorghum bicolor
Sobic.001G473800 5.0kb upstream 5.0kb upstream 7915 true Chr01: 74589865-74597779 Sorghum bicolor
Sobic.001G473800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 74589865-74594864 Sorghum bicolor
Sobic.001G473800 5.0kb downstream 5.0kb downstream 7915 true Chr01: 74594865-74602779 Sorghum bicolor
Sobic.001G473800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 74597780-74602779 Sorghum bicolor
Sobic.001G473800 10.0kb upstream 10.0kb upstream 12915 true Chr01: 74584865-74597779 Sorghum bicolor
Sobic.001G473800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 74584865-74594864 Sorghum bicolor
Sobic.001G473800 10.0kb downstream 10.0kb downstream 12915 true Chr01: 74594865-74607779 Sorghum bicolor
Sobic.001G473800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 74597780-74607779 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184399 5267 Panicoideae View MSA
124577931 5269 Grass View MSA
122046627 5273 Angiosperm View MSA
121350433 5274 Embryophyte View MSA
123381728 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.286       High
cufflinks 1.6       Low
cufflinks 2.488       Low
cufflinks 4.23        
cufflinks 4.535        
cufflinks 4.021        
cufflinks 3.846        
cufflinks 1.94       Low
cufflinks 4.646        
cufflinks 5.741        
cufflinks 4.511        
cufflinks 5.099        
cufflinks 3.952        
cufflinks 4.312        
cufflinks 4.514        
cufflinks 2.854        
cufflinks 3.992        
cufflinks 4.192        
cufflinks 1.823       Low
cufflinks 3.732        
cufflinks 6.194       High
cufflinks 5.027        
cufflinks 4.877        
cufflinks 5.587        
cufflinks 2.055       Low
cufflinks 1.369       Low
cufflinks 5.426        
cufflinks 2.107       Low
cufflinks 3.019        
cufflinks 5.027        

0 Strain