Gene : Sobic.001G472500 S. bicolor v3.1.1
Defline:  (1 of 5) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  4963
Name:  ? Sobic.001G472500 Secondary Identifier:  ? PAC:37944263
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G472500 0.5kb upstream 0.5kb upstream 4794 true Chr01: 74486588-74491381 Sorghum bicolor
Sobic.001G472500 0.5kb upstream 0.5kb upstream 500 false Chr01: 74490882-74491381 Sorghum bicolor
Sobic.001G472500 0.5kb downstream 0.5kb downstream 4794 true Chr01: 74486088-74490881 Sorghum bicolor
Sobic.001G472500 0.5kb downstream 0.5kb downstream 500 false Chr01: 74486088-74486587 Sorghum bicolor
Sobic.001G472500 1.0kb upstream 1.0kb upstream 5294 true Chr01: 74486588-74491881 Sorghum bicolor
Sobic.001G472500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 74490882-74491881 Sorghum bicolor
Sobic.001G472500 1.0kb downstream 1.0kb downstream 5294 true Chr01: 74485588-74490881 Sorghum bicolor
Sobic.001G472500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 74485588-74486587 Sorghum bicolor
Sobic.001G472500 2.0kb upstream 2.0kb upstream 6294 true Chr01: 74486588-74492881 Sorghum bicolor
Sobic.001G472500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 74490882-74492881 Sorghum bicolor
Sobic.001G472500 2.0kb downstream 2.0kb downstream 6294 true Chr01: 74484588-74490881 Sorghum bicolor
Sobic.001G472500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 74484588-74486587 Sorghum bicolor
Sobic.001G472500 5.0kb upstream 5.0kb upstream 9294 true Chr01: 74486588-74495881 Sorghum bicolor
Sobic.001G472500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 74490882-74495881 Sorghum bicolor
Sobic.001G472500 5.0kb downstream 5.0kb downstream 9294 true Chr01: 74481588-74490881 Sorghum bicolor
Sobic.001G472500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 74481588-74486587 Sorghum bicolor
Sobic.001G472500 10.0kb upstream 10.0kb upstream 14294 true Chr01: 74486588-74500881 Sorghum bicolor
Sobic.001G472500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 74490882-74500881 Sorghum bicolor
Sobic.001G472500 10.0kb downstream 10.0kb downstream 14294 true Chr01: 74476588-74490881 Sorghum bicolor
Sobic.001G472500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 74476588-74486587 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027710 5273 Angiosperm View MSA
122181544 5267 Panicoideae View MSA
124585828 5269 Grass View MSA
123428914 5275 Viridiplantae View MSA
121349627 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.083       High
cufflinks 1.876        
cufflinks 4.19       High
cufflinks 2.671        
cufflinks 3.02        
cufflinks 4.74       High
cufflinks 1.938        
cufflinks 2.908        
cufflinks 2.737        
cufflinks 2.717        
cufflinks 2.479        
cufflinks 1.905        
cufflinks 3.521        
cufflinks 3.271        
cufflinks 4.907       High
cufflinks 2.769        
cufflinks 2.366        
cufflinks 2.28        
cufflinks 1.948        
cufflinks 2.771        
cufflinks 2.298        
cufflinks 1.432       Low
cufflinks 1.816        
cufflinks 1.776       Low
cufflinks 2.291        
cufflinks 2.641        
cufflinks 2.495        
cufflinks 6.502       High
cufflinks 2.745        
cufflinks 3.516        

0 Strain