Gene : Sobic.001G466300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR17490 - SUA5 Genomic Order:  4897
Name:  ? Sobic.001G466300 Secondary Identifier:  ? PAC:37942372
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G466300 0.5kb upstream 0.5kb upstream 4477 true Chr01: 73980310-73984786 Sorghum bicolor
Sobic.001G466300 0.5kb upstream 0.5kb upstream 500 false Chr01: 73980310-73980809 Sorghum bicolor
Sobic.001G466300 0.5kb downstream 0.5kb downstream 4477 true Chr01: 73980810-73985286 Sorghum bicolor
Sobic.001G466300 0.5kb downstream 0.5kb downstream 500 false Chr01: 73984787-73985286 Sorghum bicolor
Sobic.001G466300 1.0kb upstream 1.0kb upstream 4977 true Chr01: 73979810-73984786 Sorghum bicolor
Sobic.001G466300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 73979810-73980809 Sorghum bicolor
Sobic.001G466300 1.0kb downstream 1.0kb downstream 4977 true Chr01: 73980810-73985786 Sorghum bicolor
Sobic.001G466300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 73984787-73985786 Sorghum bicolor
Sobic.001G466300 2.0kb upstream 2.0kb upstream 5977 true Chr01: 73978810-73984786 Sorghum bicolor
Sobic.001G466300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 73978810-73980809 Sorghum bicolor
Sobic.001G466300 2.0kb downstream 2.0kb downstream 5977 true Chr01: 73980810-73986786 Sorghum bicolor
Sobic.001G466300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 73984787-73986786 Sorghum bicolor
Sobic.001G466300 5.0kb upstream 5.0kb upstream 8977 true Chr01: 73975810-73984786 Sorghum bicolor
Sobic.001G466300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 73975810-73980809 Sorghum bicolor
Sobic.001G466300 5.0kb downstream 5.0kb downstream 8977 true Chr01: 73980810-73989786 Sorghum bicolor
Sobic.001G466300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 73984787-73989786 Sorghum bicolor
Sobic.001G466300 10.0kb upstream 10.0kb upstream 13977 true Chr01: 73970810-73984786 Sorghum bicolor
Sobic.001G466300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 73970810-73980809 Sorghum bicolor
Sobic.001G466300 10.0kb downstream 10.0kb downstream 13977 true Chr01: 73980810-73994786 Sorghum bicolor
Sobic.001G466300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 73984787-73994786 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041229 5273 Angiosperm View MSA
122180788 5267 Panicoideae View MSA
124569697 5269 Grass View MSA
121344948 5274 Embryophyte View MSA
123425392 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.6        
cufflinks 0.27       Low
cufflinks 1.446        
cufflinks 3.101       High
cufflinks 0.521       Low
cufflinks 1.742        
cufflinks 0.86        
cufflinks 0.447       Low
cufflinks 2.442       High
cufflinks 1.82        
cufflinks 1.549        
cufflinks 1.835        
cufflinks 0.743        
cufflinks 1.239        
cufflinks 1.409        
cufflinks 1.487        
cufflinks 1.056        
cufflinks 1.03        
cufflinks 0.832        
cufflinks 2.031       High
cufflinks 2.37       High
cufflinks 1.364        
cufflinks 1.319        
cufflinks 1.515        
cufflinks 0.547        
cufflinks 0.177       Low
cufflinks 1.689        
cufflinks 4.185       High
cufflinks 0.994        
cufflinks 1.767        

0 Strain