Gene : Sobic.001G465900 S. bicolor v3.1.1
Defline:  (1 of 3) K00860 - adenylylsulfate kinase (cysC) Genomic Order:  4893
Name:  ? Sobic.001G465900 Secondary Identifier:  ? PAC:37938190
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5340 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G465900 0.5kb upstream 0.5kb upstream 5366 true Chr01: 73954449-73959814 Sorghum bicolor
Sobic.001G465900 0.5kb upstream 0.5kb upstream 500 false Chr01: 73954449-73954948 Sorghum bicolor
Sobic.001G465900 0.5kb downstream 0.5kb downstream 5366 true Chr01: 73954949-73960314 Sorghum bicolor
Sobic.001G465900 0.5kb downstream 0.5kb downstream 500 false Chr01: 73959815-73960314 Sorghum bicolor
Sobic.001G465900 1.0kb upstream 1.0kb upstream 5866 true Chr01: 73953949-73959814 Sorghum bicolor
Sobic.001G465900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 73953949-73954948 Sorghum bicolor
Sobic.001G465900 1.0kb downstream 1.0kb downstream 5866 true Chr01: 73954949-73960814 Sorghum bicolor
Sobic.001G465900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 73959815-73960814 Sorghum bicolor
Sobic.001G465900 2.0kb upstream 2.0kb upstream 6866 true Chr01: 73952949-73959814 Sorghum bicolor
Sobic.001G465900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 73952949-73954948 Sorghum bicolor
Sobic.001G465900 2.0kb downstream 2.0kb downstream 6866 true Chr01: 73954949-73961814 Sorghum bicolor
Sobic.001G465900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 73959815-73961814 Sorghum bicolor
Sobic.001G465900 5.0kb upstream 5.0kb upstream 9866 true Chr01: 73949949-73959814 Sorghum bicolor
Sobic.001G465900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 73949949-73954948 Sorghum bicolor
Sobic.001G465900 5.0kb downstream 5.0kb downstream 9866 true Chr01: 73954949-73964814 Sorghum bicolor
Sobic.001G465900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 73959815-73964814 Sorghum bicolor
Sobic.001G465900 10.0kb upstream 10.0kb upstream 14866 true Chr01: 73944949-73959814 Sorghum bicolor
Sobic.001G465900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 73944949-73954948 Sorghum bicolor
Sobic.001G465900 10.0kb downstream 10.0kb downstream 14866 true Chr01: 73954949-73969814 Sorghum bicolor
Sobic.001G465900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 73959815-73969814 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183178 5267 Panicoideae View MSA
124581743 5269 Grass View MSA
122042976 5273 Angiosperm View MSA
121348036 5274 Embryophyte View MSA
123424073 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.72        
cufflinks 4.761        
cufflinks 2.873        
cufflinks 2.734        
cufflinks 1.979        
cufflinks 10.758       High
cufflinks 4.005        
cufflinks 9.178     High High
cufflinks 0.553       Low
cufflinks 0.877       Low
cufflinks 9.416       High
cufflinks 8.616        
cufflinks 0.996       Low
cufflinks 10.291       High
cufflinks 3.508        
cufflinks 4.208        
cufflinks 4.051        
cufflinks 4.38        
cufflinks 4.698        
cufflinks 3.514        
cufflinks 2.46        
cufflinks 7.151        
cufflinks 7.63        
cufflinks 7.106        
cufflinks 0.478       Low
cufflinks 2.439        
cufflinks 9.925       High
cufflinks 0.117       Low
cufflinks 9.024        
cufflinks 1.896        

0 Strain