Gene : Sobic.005G112300 S. bicolor v3.1.1
Defline:  (1 of 1) PF06337//PF13423//PF14533 - DUSP domain (DUSP) // Ubiquitin carboxyl-terminal hydrolase (UCH_1) // Ubiquitin-specific protease C-terminal (USP7_C2) Genomic Order:  1219
Name:  ? Sobic.005G112300 Secondary Identifier:  ? PAC:37925558
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G112300 0.5kb upstream 0.5kb upstream 11642 true Chr05: 38416700-38428341 Sorghum bicolor
Sobic.005G112300 0.5kb upstream 0.5kb upstream 500 false Chr05: 38416700-38417199 Sorghum bicolor
Sobic.005G112300 0.5kb downstream 0.5kb downstream 11642 true Chr05: 38417200-38428841 Sorghum bicolor
Sobic.005G112300 0.5kb downstream 0.5kb downstream 500 false Chr05: 38428342-38428841 Sorghum bicolor
Sobic.005G112300 1.0kb upstream 1.0kb upstream 12142 true Chr05: 38416200-38428341 Sorghum bicolor
Sobic.005G112300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38416200-38417199 Sorghum bicolor
Sobic.005G112300 1.0kb downstream 1.0kb downstream 12142 true Chr05: 38417200-38429341 Sorghum bicolor
Sobic.005G112300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38428342-38429341 Sorghum bicolor
Sobic.005G112300 2.0kb upstream 2.0kb upstream 13142 true Chr05: 38415200-38428341 Sorghum bicolor
Sobic.005G112300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38415200-38417199 Sorghum bicolor
Sobic.005G112300 2.0kb downstream 2.0kb downstream 13142 true Chr05: 38417200-38430341 Sorghum bicolor
Sobic.005G112300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38428342-38430341 Sorghum bicolor
Sobic.005G112300 5.0kb upstream 5.0kb upstream 16142 true Chr05: 38412200-38428341 Sorghum bicolor
Sobic.005G112300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38412200-38417199 Sorghum bicolor
Sobic.005G112300 5.0kb downstream 5.0kb downstream 16142 true Chr05: 38417200-38433341 Sorghum bicolor
Sobic.005G112300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38428342-38433341 Sorghum bicolor
Sobic.005G112300 10.0kb upstream 10.0kb upstream 21142 true Chr05: 38407200-38428341 Sorghum bicolor
Sobic.005G112300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38407200-38417199 Sorghum bicolor
Sobic.005G112300 10.0kb downstream 10.0kb downstream 21142 true Chr05: 38417200-38438341 Sorghum bicolor
Sobic.005G112300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38428342-38438341 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184904 5267 Panicoideae View MSA
124581118 5269 Grass View MSA
122043938 5273 Angiosperm View MSA
121310212 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.563       Low
cufflinks 2.447       Low
cufflinks 3.425        
cufflinks 4.029        
cufflinks 5.785       High
cufflinks 4.125        
cufflinks 4.139        
cufflinks 2.368       Low
cufflinks 5.874       High
cufflinks 6.121       High
cufflinks 4.329        
cufflinks 5.407        
cufflinks 5.232        
cufflinks 3.978        
cufflinks 4.996        
cufflinks 3.164        
cufflinks 4.239        
cufflinks 4.319        
cufflinks 3.174        
cufflinks 5.069        
cufflinks 7.657       High
cufflinks 4.013        
cufflinks 4.608        
cufflinks 4.48        
cufflinks 3.911        
cufflinks 2.774       Low
cufflinks 4.957        
cufflinks 1.796       Low
cufflinks 3.32        
cufflinks 5.101        

0 Strain