Gene : Sobic.005G111700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12506//PTHR12506:SF25 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  1211
Name:  ? Sobic.005G111700 Secondary Identifier:  ? PAC:37925465
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G111700 0.5kb upstream 0.5kb upstream 29141 true Chr05: 36865778-36894918 Sorghum bicolor
Sobic.005G111700 0.5kb upstream 0.5kb upstream 500 false Chr05: 36894419-36894918 Sorghum bicolor
Sobic.005G111700 0.5kb downstream 0.5kb downstream 29141 true Chr05: 36865278-36894418 Sorghum bicolor
Sobic.005G111700 0.5kb downstream 0.5kb downstream 500 false Chr05: 36865278-36865777 Sorghum bicolor
Sobic.005G111700 1.0kb upstream 1.0kb upstream 29641 true Chr05: 36865778-36895418 Sorghum bicolor
Sobic.005G111700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36894419-36895418 Sorghum bicolor
Sobic.005G111700 1.0kb downstream 1.0kb downstream 29641 true Chr05: 36864778-36894418 Sorghum bicolor
Sobic.005G111700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36864778-36865777 Sorghum bicolor
Sobic.005G111700 2.0kb upstream 2.0kb upstream 30641 true Chr05: 36865778-36896418 Sorghum bicolor
Sobic.005G111700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36894419-36896418 Sorghum bicolor
Sobic.005G111700 2.0kb downstream 2.0kb downstream 30641 true Chr05: 36863778-36894418 Sorghum bicolor
Sobic.005G111700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36863778-36865777 Sorghum bicolor
Sobic.005G111700 5.0kb upstream 5.0kb upstream 33641 true Chr05: 36865778-36899418 Sorghum bicolor
Sobic.005G111700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36894419-36899418 Sorghum bicolor
Sobic.005G111700 5.0kb downstream 5.0kb downstream 33641 true Chr05: 36860778-36894418 Sorghum bicolor
Sobic.005G111700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36860778-36865777 Sorghum bicolor
Sobic.005G111700 10.0kb upstream 10.0kb upstream 38641 true Chr05: 36865778-36904418 Sorghum bicolor
Sobic.005G111700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36894419-36904418 Sorghum bicolor
Sobic.005G111700 10.0kb downstream 10.0kb downstream 38641 true Chr05: 36855778-36894418 Sorghum bicolor
Sobic.005G111700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36855778-36865777 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183615 5267 Panicoideae View MSA
124574800 5269 Grass View MSA
122047416 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.676        
cufflinks 4.14       High
cufflinks 2.178        
cufflinks 1.179        
cufflinks 0.986       Low
cufflinks 1.566        
cufflinks 2.664        
cufflinks 3.463       High
cufflinks 1.384        
cufflinks 1.731        
cufflinks 1.233        
cufflinks 1.798        
cufflinks 2.004        
cufflinks 1.961        
cufflinks 2.419        
cufflinks 3.044       High
cufflinks 2.699        
cufflinks 2.629        
cufflinks 3.265       High
cufflinks 2.305        
cufflinks 1.16        
cufflinks 1.31        
cufflinks 1.813        
cufflinks 1.825        
cufflinks 2.913       High
cufflinks 4.504       High
cufflinks 1.2        
cufflinks 0.26       Low
cufflinks 1.89        
cufflinks 1.806        

0 Strain