Gene : Sobic.001G463000 S. bicolor v3.1.1
Defline:  (1 of 5) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  4861
Name:  ? Sobic.001G463000 Secondary Identifier:  ? PAC:37938958
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G463000 0.5kb upstream 0.5kb upstream 4584 true Chr01: 73728256-73732839 Sorghum bicolor
Sobic.001G463000 0.5kb upstream 0.5kb upstream 500 false Chr01: 73728256-73728755 Sorghum bicolor
Sobic.001G463000 0.5kb downstream 0.5kb downstream 4584 true Chr01: 73728756-73733339 Sorghum bicolor
Sobic.001G463000 0.5kb downstream 0.5kb downstream 500 false Chr01: 73732840-73733339 Sorghum bicolor
Sobic.001G463000 1.0kb upstream 1.0kb upstream 5084 true Chr01: 73727756-73732839 Sorghum bicolor
Sobic.001G463000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 73727756-73728755 Sorghum bicolor
Sobic.001G463000 1.0kb downstream 1.0kb downstream 5084 true Chr01: 73728756-73733839 Sorghum bicolor
Sobic.001G463000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 73732840-73733839 Sorghum bicolor
Sobic.001G463000 2.0kb upstream 2.0kb upstream 6084 true Chr01: 73726756-73732839 Sorghum bicolor
Sobic.001G463000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 73726756-73728755 Sorghum bicolor
Sobic.001G463000 2.0kb downstream 2.0kb downstream 6084 true Chr01: 73728756-73734839 Sorghum bicolor
Sobic.001G463000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 73732840-73734839 Sorghum bicolor
Sobic.001G463000 5.0kb upstream 5.0kb upstream 9084 true Chr01: 73723756-73732839 Sorghum bicolor
Sobic.001G463000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 73723756-73728755 Sorghum bicolor
Sobic.001G463000 5.0kb downstream 5.0kb downstream 9084 true Chr01: 73728756-73737839 Sorghum bicolor
Sobic.001G463000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 73732840-73737839 Sorghum bicolor
Sobic.001G463000 10.0kb upstream 10.0kb upstream 14084 true Chr01: 73718756-73732839 Sorghum bicolor
Sobic.001G463000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 73718756-73728755 Sorghum bicolor
Sobic.001G463000 10.0kb downstream 10.0kb downstream 14084 true Chr01: 73728756-73742839 Sorghum bicolor
Sobic.001G463000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 73732840-73742839 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180866 5267 Panicoideae View MSA
124574608 5269 Grass View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.583     High  
cufflinks 17.299     High  
cufflinks 123.23     High High
cufflinks 142.559     High High
cufflinks 58.582     High  
cufflinks 64.212     High  
cufflinks 16.216     High  
cufflinks 12.206     High Low
cufflinks 47.08     High  
cufflinks 60.397     High  
cufflinks 50.948     High  
cufflinks 22.008     High  
cufflinks 67.094     High  
cufflinks 18.568     High  
cufflinks 58.506     High  
cufflinks 22.09     High  
cufflinks 15.61     High  
cufflinks 16.581     High  
cufflinks 52.716     High  
cufflinks 18.191     High  
cufflinks 14.092       Low
cufflinks 18.042     High  
cufflinks 19.452     High  
cufflinks 19.127     High  
cufflinks 27.367     High  
cufflinks 15.951     High  
cufflinks 84.0     High High
cufflinks 9.963     High Low
cufflinks 14.466     High Low
cufflinks 54.387     High  

0 Strain