Gene : Sobic.001G451500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR20852//PTHR20852:SF61 - GLUTAMINE SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  4737
Name:  ? Sobic.001G451500 Secondary Identifier:  ? PAC:37944374
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Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor GLNSYN-PWY Sorghum bicolor pathologic  
Sbicolor PWY-3282 Sorghum bicolor pathologic  
Sbicolor PWY-381 Sorghum bicolor pathologic  
Sbicolor PWY-6549 Sorghum bicolor pathologic  
Sbicolor PWY-6963 Sorghum bicolor pathologic  
Sbicolor PWY-6964 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G451500 0.5kb upstream 0.5kb upstream 4639 true Chr01: 72836960-72841598 Sorghum bicolor
Sobic.001G451500 0.5kb upstream 0.5kb upstream 500 false Chr01: 72836960-72837459 Sorghum bicolor
Sobic.001G451500 0.5kb downstream 0.5kb downstream 4639 true Chr01: 72837460-72842098 Sorghum bicolor
Sobic.001G451500 0.5kb downstream 0.5kb downstream 500 false Chr01: 72841599-72842098 Sorghum bicolor
Sobic.001G451500 1.0kb upstream 1.0kb upstream 5139 true Chr01: 72836460-72841598 Sorghum bicolor
Sobic.001G451500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 72836460-72837459 Sorghum bicolor
Sobic.001G451500 1.0kb downstream 1.0kb downstream 5139 true Chr01: 72837460-72842598 Sorghum bicolor
Sobic.001G451500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 72841599-72842598 Sorghum bicolor
Sobic.001G451500 2.0kb upstream 2.0kb upstream 6139 true Chr01: 72835460-72841598 Sorghum bicolor
Sobic.001G451500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 72835460-72837459 Sorghum bicolor
Sobic.001G451500 2.0kb downstream 2.0kb downstream 6139 true Chr01: 72837460-72843598 Sorghum bicolor
Sobic.001G451500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72841599-72843598 Sorghum bicolor
Sobic.001G451500 5.0kb upstream 5.0kb upstream 9139 true Chr01: 72832460-72841598 Sorghum bicolor
Sobic.001G451500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 72832460-72837459 Sorghum bicolor
Sobic.001G451500 5.0kb downstream 5.0kb downstream 9139 true Chr01: 72837460-72846598 Sorghum bicolor
Sobic.001G451500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72841599-72846598 Sorghum bicolor
Sobic.001G451500 10.0kb upstream 10.0kb upstream 14139 true Chr01: 72827460-72841598 Sorghum bicolor
Sobic.001G451500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 72827460-72837459 Sorghum bicolor
Sobic.001G451500 10.0kb downstream 10.0kb downstream 14139 true Chr01: 72837460-72851598 Sorghum bicolor
Sobic.001G451500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72841599-72851598 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187391 5267 Panicoideae View MSA
124578405 5269 Grass View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.862       Low
cufflinks 12.887     High  
cufflinks 14.806     High  
cufflinks 4.058        
cufflinks 3.951        
cufflinks 3.612        
cufflinks 18.557     High  
cufflinks 6.76        
cufflinks 6.085        
cufflinks 34.773     High High
cufflinks 21.97     High  
cufflinks 41.009     High High
cufflinks 36.729     High High
cufflinks 93.124     High High
cufflinks 9.418        
cufflinks 18.164     High  
cufflinks 14.438     High  
cufflinks 11.604     High  
cufflinks 10.216        
cufflinks 6.366        
cufflinks 0.356       Low
cufflinks 11.934     High  
cufflinks 18.608     High  
cufflinks 27.602     High  
cufflinks 15.768     High  
cufflinks 13.604     High  
cufflinks 27.937     High  
cufflinks 0.085       Low
cufflinks 0.645       Low
cufflinks 3.778        

0 Strain