Gene : Sobic.001G451400 S. bicolor v3.1.1
Defline:  (1 of 1) K15305 - vacuole morphology and inheritance protein 14 (VAC14, TAX1BP2) Genomic Order:  4735
Name:  ? Sobic.001G451400 Secondary Identifier:  ? PAC:37939299
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G451400 0.5kb upstream 0.5kb upstream 9405 true Chr01: 72824631-72834035 Sorghum bicolor
Sobic.001G451400 0.5kb upstream 0.5kb upstream 500 false Chr01: 72824631-72825130 Sorghum bicolor
Sobic.001G451400 0.5kb downstream 0.5kb downstream 9405 true Chr01: 72825131-72834535 Sorghum bicolor
Sobic.001G451400 0.5kb downstream 0.5kb downstream 500 false Chr01: 72834036-72834535 Sorghum bicolor
Sobic.001G451400 1.0kb upstream 1.0kb upstream 9905 true Chr01: 72824131-72834035 Sorghum bicolor
Sobic.001G451400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 72824131-72825130 Sorghum bicolor
Sobic.001G451400 1.0kb downstream 1.0kb downstream 9905 true Chr01: 72825131-72835035 Sorghum bicolor
Sobic.001G451400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 72834036-72835035 Sorghum bicolor
Sobic.001G451400 2.0kb upstream 2.0kb upstream 10905 true Chr01: 72823131-72834035 Sorghum bicolor
Sobic.001G451400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 72823131-72825130 Sorghum bicolor
Sobic.001G451400 2.0kb downstream 2.0kb downstream 10905 true Chr01: 72825131-72836035 Sorghum bicolor
Sobic.001G451400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72834036-72836035 Sorghum bicolor
Sobic.001G451400 5.0kb upstream 5.0kb upstream 13905 true Chr01: 72820131-72834035 Sorghum bicolor
Sobic.001G451400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 72820131-72825130 Sorghum bicolor
Sobic.001G451400 5.0kb downstream 5.0kb downstream 13905 true Chr01: 72825131-72839035 Sorghum bicolor
Sobic.001G451400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72834036-72839035 Sorghum bicolor
Sobic.001G451400 10.0kb upstream 10.0kb upstream 18905 true Chr01: 72815131-72834035 Sorghum bicolor
Sobic.001G451400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 72815131-72825130 Sorghum bicolor
Sobic.001G451400 10.0kb downstream 10.0kb downstream 18905 true Chr01: 72825131-72844035 Sorghum bicolor
Sobic.001G451400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72834036-72844035 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188907 5267 Panicoideae View MSA
124577234 5269 Grass View MSA
122047421 5273 Angiosperm View MSA
121346915 5274 Embryophyte View MSA
123428205 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.961       Low
cufflinks 10.456     High  
cufflinks 16.467     High  
cufflinks 12.799     High  
cufflinks 14.509     High  
cufflinks 9.809        
cufflinks 12.244     High  
cufflinks 9.522     High Low
cufflinks 19.874     High High
cufflinks 20.228     High High
cufflinks 14.672     High  
cufflinks 15.52     High  
cufflinks 17.71     High  
cufflinks 13.58     High  
cufflinks 18.875     High High
cufflinks 12.641     High  
cufflinks 12.447     High  
cufflinks 12.011     High  
cufflinks 14.075     High  
cufflinks 15.345     High  
cufflinks 16.551     High  
cufflinks 16.003     High  
cufflinks 13.858     High  
cufflinks 13.923     High  
cufflinks 15.396     High  
cufflinks 11.671     High  
cufflinks 15.617     High  
cufflinks 6.197       Low
cufflinks 9.457       Low
cufflinks 18.575     High High

0 Strain