Gene : Sobic.001G450800 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10788:SF48 - ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 Genomic Order:  4728
Name:  ? Sobic.001G450800 Secondary Identifier:  ? PAC:37942341
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G450800 0.5kb upstream 0.5kb upstream 5063 true Chr01: 72765729-72770791 Sorghum bicolor
Sobic.001G450800 0.5kb upstream 0.5kb upstream 500 false Chr01: 72765729-72766228 Sorghum bicolor
Sobic.001G450800 0.5kb downstream 0.5kb downstream 5063 true Chr01: 72766229-72771291 Sorghum bicolor
Sobic.001G450800 0.5kb downstream 0.5kb downstream 500 false Chr01: 72770792-72771291 Sorghum bicolor
Sobic.001G450800 1.0kb upstream 1.0kb upstream 5563 true Chr01: 72765229-72770791 Sorghum bicolor
Sobic.001G450800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 72765229-72766228 Sorghum bicolor
Sobic.001G450800 1.0kb downstream 1.0kb downstream 5563 true Chr01: 72766229-72771791 Sorghum bicolor
Sobic.001G450800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 72770792-72771791 Sorghum bicolor
Sobic.001G450800 2.0kb upstream 2.0kb upstream 6563 true Chr01: 72764229-72770791 Sorghum bicolor
Sobic.001G450800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 72764229-72766228 Sorghum bicolor
Sobic.001G450800 2.0kb downstream 2.0kb downstream 6563 true Chr01: 72766229-72772791 Sorghum bicolor
Sobic.001G450800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72770792-72772791 Sorghum bicolor
Sobic.001G450800 5.0kb upstream 5.0kb upstream 9563 true Chr01: 72761229-72770791 Sorghum bicolor
Sobic.001G450800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 72761229-72766228 Sorghum bicolor
Sobic.001G450800 5.0kb downstream 5.0kb downstream 9563 true Chr01: 72766229-72775791 Sorghum bicolor
Sobic.001G450800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72770792-72775791 Sorghum bicolor
Sobic.001G450800 10.0kb upstream 10.0kb upstream 14563 true Chr01: 72756229-72770791 Sorghum bicolor
Sobic.001G450800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 72756229-72766228 Sorghum bicolor
Sobic.001G450800 10.0kb downstream 10.0kb downstream 14563 true Chr01: 72766229-72780791 Sorghum bicolor
Sobic.001G450800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72770792-72780791 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184823 5267 Panicoideae View MSA
124572000 5269 Grass View MSA
122049755 5273 Angiosperm View MSA
121348711 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.307        
cufflinks 2.151       Low
cufflinks 6.736       Low
cufflinks 16.345     High  
cufflinks 54.975     High  
cufflinks 34.524     High  
cufflinks 21.682     High  
cufflinks 17.391     High  
cufflinks 195.699     High High
cufflinks 155.048     High High
cufflinks 27.471     High  
cufflinks 37.967     High  
cufflinks 107.521     High High
cufflinks 23.489     High  
cufflinks 22.815     High  
cufflinks 4.327       Low
cufflinks 19.753     High  
cufflinks 16.532     High  
cufflinks 18.997     High  
cufflinks 36.959     High  
cufflinks 38.5     High  
cufflinks 24.577     High  
cufflinks 28.555     High  
cufflinks 29.953     High  
cufflinks 5.342       Low
cufflinks 2.678       Low
cufflinks 37.439     High  
cufflinks 6.139       Low
cufflinks 13.72     High  
cufflinks 22.022     High  

0 Strain