Gene : Sobic.001G453500 S. bicolor v3.1.1
Defline:  (1 of 2) PF10263 - SprT-like family (SprT-like) Genomic Order:  4759
Name:  ? Sobic.001G453500 Secondary Identifier:  ? PAC:37938562
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G453500 0.5kb upstream 0.5kb upstream 5495 true Chr01: 73001985-73007479 Sorghum bicolor
Sobic.001G453500 0.5kb upstream 0.5kb upstream 500 false Chr01: 73006980-73007479 Sorghum bicolor
Sobic.001G453500 0.5kb downstream 0.5kb downstream 5495 true Chr01: 73001485-73006979 Sorghum bicolor
Sobic.001G453500 0.5kb downstream 0.5kb downstream 500 false Chr01: 73001485-73001984 Sorghum bicolor
Sobic.001G453500 1.0kb upstream 1.0kb upstream 5995 true Chr01: 73001985-73007979 Sorghum bicolor
Sobic.001G453500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 73006980-73007979 Sorghum bicolor
Sobic.001G453500 1.0kb downstream 1.0kb downstream 5995 true Chr01: 73000985-73006979 Sorghum bicolor
Sobic.001G453500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 73000985-73001984 Sorghum bicolor
Sobic.001G453500 2.0kb upstream 2.0kb upstream 6995 true Chr01: 73001985-73008979 Sorghum bicolor
Sobic.001G453500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 73006980-73008979 Sorghum bicolor
Sobic.001G453500 2.0kb downstream 2.0kb downstream 6995 true Chr01: 72999985-73006979 Sorghum bicolor
Sobic.001G453500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72999985-73001984 Sorghum bicolor
Sobic.001G453500 5.0kb upstream 5.0kb upstream 9995 true Chr01: 73001985-73011979 Sorghum bicolor
Sobic.001G453500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 73006980-73011979 Sorghum bicolor
Sobic.001G453500 5.0kb downstream 5.0kb downstream 9995 true Chr01: 72996985-73006979 Sorghum bicolor
Sobic.001G453500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72996985-73001984 Sorghum bicolor
Sobic.001G453500 10.0kb upstream 10.0kb upstream 14995 true Chr01: 73001985-73016979 Sorghum bicolor
Sobic.001G453500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 73006980-73016979 Sorghum bicolor
Sobic.001G453500 10.0kb downstream 10.0kb downstream 14995 true Chr01: 72991985-73006979 Sorghum bicolor
Sobic.001G453500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72991985-73001984 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184242 5267 Panicoideae View MSA
124571098 5269 Grass View MSA
122049000 5273 Angiosperm View MSA
121311202 5274 Embryophyte View MSA
123426815 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.209        
cufflinks 0.09       Low
cufflinks 0.128       Low
cufflinks 0.49        
cufflinks 1.728       High
cufflinks 0.626        
cufflinks 1.021        
cufflinks 0.214       Low
cufflinks 1.882       High
cufflinks 1.573       High
cufflinks 0.552        
cufflinks 0.786        
cufflinks 0.6        
cufflinks 0.527        
cufflinks 0.767        
cufflinks 0.23       Low
cufflinks 0.965        
cufflinks 0.99        
cufflinks 0.227       Low
cufflinks 1.038        
cufflinks 4.683       High
cufflinks 0.501        
cufflinks 0.707        
cufflinks 0.644        
cufflinks 0.159       Low
cufflinks 0.093       Low
cufflinks 0.697        
cufflinks 1.883       High
cufflinks 0.4        
cufflinks 1.145        

0 Strain