Gene : Sobic.001G452600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR15454:SF7 - SERINE/THREONINE-PROTEIN KINASE 11-INTERACTING PROTEIN Genomic Order:  4748
Name:  ? Sobic.001G452600 Secondary Identifier:  ? PAC:37943635
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G452600 0.5kb upstream 0.5kb upstream 10424 true Chr01: 72914103-72924526 Sorghum bicolor
Sobic.001G452600 0.5kb upstream 0.5kb upstream 500 false Chr01: 72914103-72914602 Sorghum bicolor
Sobic.001G452600 0.5kb downstream 0.5kb downstream 10424 true Chr01: 72914603-72925026 Sorghum bicolor
Sobic.001G452600 0.5kb downstream 0.5kb downstream 500 false Chr01: 72924527-72925026 Sorghum bicolor
Sobic.001G452600 1.0kb upstream 1.0kb upstream 10924 true Chr01: 72913603-72924526 Sorghum bicolor
Sobic.001G452600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 72913603-72914602 Sorghum bicolor
Sobic.001G452600 1.0kb downstream 1.0kb downstream 10924 true Chr01: 72914603-72925526 Sorghum bicolor
Sobic.001G452600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 72924527-72925526 Sorghum bicolor
Sobic.001G452600 2.0kb upstream 2.0kb upstream 11924 true Chr01: 72912603-72924526 Sorghum bicolor
Sobic.001G452600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 72912603-72914602 Sorghum bicolor
Sobic.001G452600 2.0kb downstream 2.0kb downstream 11924 true Chr01: 72914603-72926526 Sorghum bicolor
Sobic.001G452600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72924527-72926526 Sorghum bicolor
Sobic.001G452600 5.0kb upstream 5.0kb upstream 14924 true Chr01: 72909603-72924526 Sorghum bicolor
Sobic.001G452600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 72909603-72914602 Sorghum bicolor
Sobic.001G452600 5.0kb downstream 5.0kb downstream 14924 true Chr01: 72914603-72929526 Sorghum bicolor
Sobic.001G452600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72924527-72929526 Sorghum bicolor
Sobic.001G452600 10.0kb upstream 10.0kb upstream 19924 true Chr01: 72904603-72924526 Sorghum bicolor
Sobic.001G452600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 72904603-72914602 Sorghum bicolor
Sobic.001G452600 10.0kb downstream 10.0kb downstream 19924 true Chr01: 72914603-72934526 Sorghum bicolor
Sobic.001G452600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72924527-72934526 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179586 5267 Panicoideae View MSA
124570012 5269 Grass View MSA
122043032 5273 Angiosperm View MSA
121348804 5274 Embryophyte View MSA
123427587 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.707       Low
cufflinks 1.652       Low
cufflinks 14.676     High High
cufflinks 15.2     High High
cufflinks 9.614       High
cufflinks 8.762       High
cufflinks 2.588       Low
cufflinks 1.872       Low
cufflinks 8.688       High
cufflinks 8.963       High
cufflinks 3.838        
cufflinks 5.081        
cufflinks 8.746       High
cufflinks 3.376        
cufflinks 7.489        
cufflinks 3.786        
cufflinks 2.728        
cufflinks 2.618        
cufflinks 6.979        
cufflinks 3.858        
cufflinks 4.745        
cufflinks 3.703        
cufflinks 4.585        
cufflinks 3.935        
cufflinks 3.17        
cufflinks 1.495       Low
cufflinks 6.733        
cufflinks 2.949        
cufflinks 2.749        
cufflinks 7.549        

0 Strain