Gene : Sobic.001G447100 S. bicolor v3.1.1
Defline:  (1 of 3) PF00644//PF12174 - Poly(ADP-ribose) polymerase catalytic domain (PARP) // RCD1-SRO-TAF4 (RST) plant domain (RST) Genomic Order:  4688
Name:  ? Sobic.001G447100 Secondary Identifier:  ? PAC:37937549
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G447100 0.5kb upstream 0.5kb upstream 3974 true Chr01: 72417303-72421276 Sorghum bicolor
Sobic.001G447100 0.5kb upstream 0.5kb upstream 500 false Chr01: 72417303-72417802 Sorghum bicolor
Sobic.001G447100 0.5kb downstream 0.5kb downstream 3974 true Chr01: 72417803-72421776 Sorghum bicolor
Sobic.001G447100 0.5kb downstream 0.5kb downstream 500 false Chr01: 72421277-72421776 Sorghum bicolor
Sobic.001G447100 1.0kb upstream 1.0kb upstream 4474 true Chr01: 72416803-72421276 Sorghum bicolor
Sobic.001G447100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 72416803-72417802 Sorghum bicolor
Sobic.001G447100 1.0kb downstream 1.0kb downstream 4474 true Chr01: 72417803-72422276 Sorghum bicolor
Sobic.001G447100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 72421277-72422276 Sorghum bicolor
Sobic.001G447100 2.0kb upstream 2.0kb upstream 5474 true Chr01: 72415803-72421276 Sorghum bicolor
Sobic.001G447100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 72415803-72417802 Sorghum bicolor
Sobic.001G447100 2.0kb downstream 2.0kb downstream 5474 true Chr01: 72417803-72423276 Sorghum bicolor
Sobic.001G447100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72421277-72423276 Sorghum bicolor
Sobic.001G447100 5.0kb upstream 5.0kb upstream 8474 true Chr01: 72412803-72421276 Sorghum bicolor
Sobic.001G447100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 72412803-72417802 Sorghum bicolor
Sobic.001G447100 5.0kb downstream 5.0kb downstream 8474 true Chr01: 72417803-72426276 Sorghum bicolor
Sobic.001G447100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72421277-72426276 Sorghum bicolor
Sobic.001G447100 10.0kb upstream 10.0kb upstream 13474 true Chr01: 72407803-72421276 Sorghum bicolor
Sobic.001G447100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 72407803-72417802 Sorghum bicolor
Sobic.001G447100 10.0kb downstream 10.0kb downstream 13474 true Chr01: 72417803-72431276 Sorghum bicolor
Sobic.001G447100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72421277-72431276 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182964 5267 Panicoideae View MSA
124576492 5269 Grass View MSA
122047704 5273 Angiosperm View MSA
121349325 5274 Embryophyte View MSA
123381278 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.001     High High
cufflinks 2.475        
cufflinks 6.957       High
cufflinks 5.956       High
cufflinks 0.244       Low
cufflinks 2.47        
cufflinks 1.228        
cufflinks 1.066        
cufflinks 1.447        
cufflinks 2.209        
cufflinks 3.732        
cufflinks 1.359        
cufflinks 2.0        
cufflinks 1.113        
cufflinks 3.616        
cufflinks 2.519        
cufflinks 1.674        
cufflinks 1.025        
cufflinks 2.415        
cufflinks 1.795        
cufflinks 0.046     Low Low
cufflinks 0.67        
cufflinks 1.35        
cufflinks 1.181        
cufflinks 1.752        
cufflinks 2.639        
cufflinks 12.055     High High
cufflinks 3.869        
cufflinks 0.539       Low
cufflinks 2.309        

0 Strain