Gene : Sobic.001G447000 S. bicolor v3.1.1
Defline:  (1 of 3) K06287 - septum formation protein (maf) Genomic Order:  4687
Name:  ? Sobic.001G447000 Secondary Identifier:  ? PAC:37939251
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G447000 0.5kb upstream 0.5kb upstream 16688 true Chr01: 72393224-72409911 Sorghum bicolor
Sobic.001G447000 0.5kb upstream 0.5kb upstream 500 false Chr01: 72409412-72409911 Sorghum bicolor
Sobic.001G447000 0.5kb downstream 0.5kb downstream 16688 true Chr01: 72392724-72409411 Sorghum bicolor
Sobic.001G447000 0.5kb downstream 0.5kb downstream 500 false Chr01: 72392724-72393223 Sorghum bicolor
Sobic.001G447000 1.0kb upstream 1.0kb upstream 17188 true Chr01: 72393224-72410411 Sorghum bicolor
Sobic.001G447000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 72409412-72410411 Sorghum bicolor
Sobic.001G447000 1.0kb downstream 1.0kb downstream 17188 true Chr01: 72392224-72409411 Sorghum bicolor
Sobic.001G447000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 72392224-72393223 Sorghum bicolor
Sobic.001G447000 2.0kb upstream 2.0kb upstream 18188 true Chr01: 72393224-72411411 Sorghum bicolor
Sobic.001G447000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 72409412-72411411 Sorghum bicolor
Sobic.001G447000 2.0kb downstream 2.0kb downstream 18188 true Chr01: 72391224-72409411 Sorghum bicolor
Sobic.001G447000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72391224-72393223 Sorghum bicolor
Sobic.001G447000 5.0kb upstream 5.0kb upstream 21188 true Chr01: 72393224-72414411 Sorghum bicolor
Sobic.001G447000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 72409412-72414411 Sorghum bicolor
Sobic.001G447000 5.0kb downstream 5.0kb downstream 21188 true Chr01: 72388224-72409411 Sorghum bicolor
Sobic.001G447000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72388224-72393223 Sorghum bicolor
Sobic.001G447000 10.0kb upstream 10.0kb upstream 26188 true Chr01: 72393224-72419411 Sorghum bicolor
Sobic.001G447000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 72409412-72419411 Sorghum bicolor
Sobic.001G447000 10.0kb downstream 10.0kb downstream 26188 true Chr01: 72383224-72409411 Sorghum bicolor
Sobic.001G447000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72383224-72393223 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185020 5267 Panicoideae View MSA
124574678 5269 Grass View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.635        
cufflinks 0.457       Low
cufflinks 1.536       High
cufflinks 2.341       High
cufflinks 0.716        
cufflinks 2.906       High
cufflinks 1.056        
cufflinks 0.839        
cufflinks 1.164        
cufflinks 1.303        
cufflinks 1.02        
cufflinks 0.787        
cufflinks 0.826        
cufflinks 0.396       Low
cufflinks 1.274        
cufflinks 1.023        
cufflinks 1.17        
cufflinks 1.617       High
cufflinks 0.56        
cufflinks 1.501        
cufflinks 1.287        
cufflinks 0.586        
cufflinks 0.827        
cufflinks 0.802        
cufflinks 0.786        
cufflinks 0.448       Low
cufflinks 0.728        
cufflinks 0.886        
cufflinks 1.939       High
cufflinks 1.442        

0 Strain