Gene : Sobic.001G445600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10133:SF22 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  4673
Name:  ? Sobic.001G445600 Secondary Identifier:  ? PAC:37938659
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G445600 0.5kb upstream 0.5kb upstream 10304 true Chr01: 72222209-72232512 Sorghum bicolor
Sobic.001G445600 0.5kb upstream 0.5kb upstream 500 false Chr01: 72222209-72222708 Sorghum bicolor
Sobic.001G445600 0.5kb downstream 0.5kb downstream 10304 true Chr01: 72222709-72233012 Sorghum bicolor
Sobic.001G445600 0.5kb downstream 0.5kb downstream 500 false Chr01: 72232513-72233012 Sorghum bicolor
Sobic.001G445600 1.0kb upstream 1.0kb upstream 10804 true Chr01: 72221709-72232512 Sorghum bicolor
Sobic.001G445600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 72221709-72222708 Sorghum bicolor
Sobic.001G445600 1.0kb downstream 1.0kb downstream 10804 true Chr01: 72222709-72233512 Sorghum bicolor
Sobic.001G445600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 72232513-72233512 Sorghum bicolor
Sobic.001G445600 2.0kb upstream 2.0kb upstream 11804 true Chr01: 72220709-72232512 Sorghum bicolor
Sobic.001G445600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 72220709-72222708 Sorghum bicolor
Sobic.001G445600 2.0kb downstream 2.0kb downstream 11804 true Chr01: 72222709-72234512 Sorghum bicolor
Sobic.001G445600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72232513-72234512 Sorghum bicolor
Sobic.001G445600 5.0kb upstream 5.0kb upstream 14804 true Chr01: 72217709-72232512 Sorghum bicolor
Sobic.001G445600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 72217709-72222708 Sorghum bicolor
Sobic.001G445600 5.0kb downstream 5.0kb downstream 14804 true Chr01: 72222709-72237512 Sorghum bicolor
Sobic.001G445600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72232513-72237512 Sorghum bicolor
Sobic.001G445600 10.0kb upstream 10.0kb upstream 19804 true Chr01: 72212709-72232512 Sorghum bicolor
Sobic.001G445600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 72212709-72222708 Sorghum bicolor
Sobic.001G445600 10.0kb downstream 10.0kb downstream 19804 true Chr01: 72222709-72242512 Sorghum bicolor
Sobic.001G445600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72232513-72242512 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181044 5267 Panicoideae View MSA
124578076 5269 Grass View MSA
122042646 5273 Angiosperm View MSA
121346899 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.491       High
cufflinks 0.91        
cufflinks 0.759        
cufflinks 0.479       Low
cufflinks 1.405        
cufflinks 1.125        
cufflinks 1.391        
cufflinks 1.139        
cufflinks 1.106        
cufflinks 1.223        
cufflinks 0.751        
cufflinks 0.743        
cufflinks 1.033        
cufflinks 0.853        
cufflinks 1.228        
cufflinks 0.822        
cufflinks 1.4        
cufflinks 1.934       High
cufflinks 0.598       Low
cufflinks 1.013        
cufflinks 2.493       High
cufflinks 1.048        
cufflinks 1.023        
cufflinks 0.912        
cufflinks 0.884        
cufflinks 0.823        
cufflinks 0.952        
cufflinks 0.509       Low
cufflinks 2.287       High
cufflinks 1.659       High

0 Strain