Gene : Sobic.001G450000 S. bicolor v3.1.1
Defline:  (1 of 1) K14300 - nuclear pore complex protein Nup133 (NUP133) Genomic Order:  4719
Name:  ? Sobic.001G450000 Secondary Identifier:  ? PAC:37944722
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G450000 0.5kb upstream 0.5kb upstream 8457 true Chr01: 72699311-72707767 Sorghum bicolor
Sobic.001G450000 0.5kb upstream 0.5kb upstream 500 false Chr01: 72707268-72707767 Sorghum bicolor
Sobic.001G450000 0.5kb downstream 0.5kb downstream 8457 true Chr01: 72698811-72707267 Sorghum bicolor
Sobic.001G450000 0.5kb downstream 0.5kb downstream 500 false Chr01: 72698811-72699310 Sorghum bicolor
Sobic.001G450000 1.0kb upstream 1.0kb upstream 8957 true Chr01: 72699311-72708267 Sorghum bicolor
Sobic.001G450000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 72707268-72708267 Sorghum bicolor
Sobic.001G450000 1.0kb downstream 1.0kb downstream 8957 true Chr01: 72698311-72707267 Sorghum bicolor
Sobic.001G450000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 72698311-72699310 Sorghum bicolor
Sobic.001G450000 2.0kb upstream 2.0kb upstream 9957 true Chr01: 72699311-72709267 Sorghum bicolor
Sobic.001G450000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 72707268-72709267 Sorghum bicolor
Sobic.001G450000 2.0kb downstream 2.0kb downstream 9957 true Chr01: 72697311-72707267 Sorghum bicolor
Sobic.001G450000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72697311-72699310 Sorghum bicolor
Sobic.001G450000 5.0kb upstream 5.0kb upstream 12957 true Chr01: 72699311-72712267 Sorghum bicolor
Sobic.001G450000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 72707268-72712267 Sorghum bicolor
Sobic.001G450000 5.0kb downstream 5.0kb downstream 12957 true Chr01: 72694311-72707267 Sorghum bicolor
Sobic.001G450000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72694311-72699310 Sorghum bicolor
Sobic.001G450000 10.0kb upstream 10.0kb upstream 17957 true Chr01: 72699311-72717267 Sorghum bicolor
Sobic.001G450000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 72707268-72717267 Sorghum bicolor
Sobic.001G450000 10.0kb downstream 10.0kb downstream 17957 true Chr01: 72689311-72707267 Sorghum bicolor
Sobic.001G450000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72689311-72699310 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196328 5267 Panicoideae View MSA
124577192 5269 Grass View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.469        
cufflinks 0.827       Low
cufflinks 1.509       Low
cufflinks 2.778        
cufflinks 9.74        
cufflinks 2.741        
cufflinks 4.489        
cufflinks 1.294       Low
cufflinks 6.564        
cufflinks 6.835        
cufflinks 7.891        
cufflinks 8.236        
cufflinks 5.088        
cufflinks 7.269        
cufflinks 5.92        
cufflinks 1.669       Low
cufflinks 4.407        
cufflinks 4.56        
cufflinks 1.634       Low
cufflinks 4.389        
cufflinks 18.144     High High
cufflinks 8.584        
cufflinks 8.974        
cufflinks 9.382        
cufflinks 1.717       Low
cufflinks 0.701       Low
cufflinks 6.898        
cufflinks 5.479        
cufflinks 2.782        
cufflinks 9.234        

0 Strain