Gene : Sobic.001G442900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12925:SF0 - PROTEIN HIKESHI Genomic Order:  4645
Name:  ? Sobic.001G442900 Secondary Identifier:  ? PAC:37942135
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G442900 0.5kb upstream 0.5kb upstream 4793 true Chr01: 72029818-72034610 Sorghum bicolor
Sobic.001G442900 0.5kb upstream 0.5kb upstream 500 false Chr01: 72034111-72034610 Sorghum bicolor
Sobic.001G442900 0.5kb downstream 0.5kb downstream 4793 true Chr01: 72029318-72034110 Sorghum bicolor
Sobic.001G442900 0.5kb downstream 0.5kb downstream 500 false Chr01: 72029318-72029817 Sorghum bicolor
Sobic.001G442900 1.0kb upstream 1.0kb upstream 5293 true Chr01: 72029818-72035110 Sorghum bicolor
Sobic.001G442900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 72034111-72035110 Sorghum bicolor
Sobic.001G442900 1.0kb downstream 1.0kb downstream 5293 true Chr01: 72028818-72034110 Sorghum bicolor
Sobic.001G442900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 72028818-72029817 Sorghum bicolor
Sobic.001G442900 2.0kb upstream 2.0kb upstream 6293 true Chr01: 72029818-72036110 Sorghum bicolor
Sobic.001G442900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 72034111-72036110 Sorghum bicolor
Sobic.001G442900 2.0kb downstream 2.0kb downstream 6293 true Chr01: 72027818-72034110 Sorghum bicolor
Sobic.001G442900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 72027818-72029817 Sorghum bicolor
Sobic.001G442900 5.0kb upstream 5.0kb upstream 9293 true Chr01: 72029818-72039110 Sorghum bicolor
Sobic.001G442900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 72034111-72039110 Sorghum bicolor
Sobic.001G442900 5.0kb downstream 5.0kb downstream 9293 true Chr01: 72024818-72034110 Sorghum bicolor
Sobic.001G442900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 72024818-72029817 Sorghum bicolor
Sobic.001G442900 10.0kb upstream 10.0kb upstream 14293 true Chr01: 72029818-72044110 Sorghum bicolor
Sobic.001G442900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 72034111-72044110 Sorghum bicolor
Sobic.001G442900 10.0kb downstream 10.0kb downstream 14293 true Chr01: 72019818-72034110 Sorghum bicolor
Sobic.001G442900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 72019818-72029817 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179613 5267 Panicoideae View MSA
124575718 5269 Grass View MSA
122044077 5273 Angiosperm View MSA
121345488 5274 Embryophyte View MSA
123425277 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.108        
cufflinks 0.029     Low Low
cufflinks 0.082        
cufflinks 0.206        
cufflinks 0.126        
cufflinks 0.143        
cufflinks 0.132        
cufflinks 0.079        
cufflinks 0.494       High
cufflinks 0.426       High
cufflinks 0.063     Low Low
cufflinks 0.163        
cufflinks 0.128        
cufflinks 0.179        
cufflinks 0.143        
cufflinks 0.175        
cufflinks 0.131        
cufflinks 0.104        
cufflinks 0.151        
cufflinks 0.308       High
cufflinks 0.233        
cufflinks 0.076     Low  
cufflinks 0.114        
cufflinks 0.113        
cufflinks 0.1        
cufflinks 0.074        
cufflinks 0.086     Low  
cufflinks 1.502       High
cufflinks 0.078     Low  
cufflinks 0.145        

0 Strain