Gene : Sobic.001G439500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23310:SF14 - PROTEIN ACBP-7 Genomic Order:  4608
Name:  ? Sobic.001G439500 Secondary Identifier:  ? PAC:37940287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G439500 0.5kb upstream 0.5kb upstream 7240 true Chr01: 71749192-71756431 Sorghum bicolor
Sobic.001G439500 0.5kb upstream 0.5kb upstream 500 false Chr01: 71755932-71756431 Sorghum bicolor
Sobic.001G439500 0.5kb downstream 0.5kb downstream 7240 true Chr01: 71748692-71755931 Sorghum bicolor
Sobic.001G439500 0.5kb downstream 0.5kb downstream 500 false Chr01: 71748692-71749191 Sorghum bicolor
Sobic.001G439500 1.0kb upstream 1.0kb upstream 7740 true Chr01: 71749192-71756931 Sorghum bicolor
Sobic.001G439500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71755932-71756931 Sorghum bicolor
Sobic.001G439500 1.0kb downstream 1.0kb downstream 7740 true Chr01: 71748192-71755931 Sorghum bicolor
Sobic.001G439500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71748192-71749191 Sorghum bicolor
Sobic.001G439500 2.0kb upstream 2.0kb upstream 8740 true Chr01: 71749192-71757931 Sorghum bicolor
Sobic.001G439500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71755932-71757931 Sorghum bicolor
Sobic.001G439500 2.0kb downstream 2.0kb downstream 8740 true Chr01: 71747192-71755931 Sorghum bicolor
Sobic.001G439500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71747192-71749191 Sorghum bicolor
Sobic.001G439500 5.0kb upstream 5.0kb upstream 11740 true Chr01: 71749192-71760931 Sorghum bicolor
Sobic.001G439500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71755932-71760931 Sorghum bicolor
Sobic.001G439500 5.0kb downstream 5.0kb downstream 11740 true Chr01: 71744192-71755931 Sorghum bicolor
Sobic.001G439500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71744192-71749191 Sorghum bicolor
Sobic.001G439500 10.0kb upstream 10.0kb upstream 16740 true Chr01: 71749192-71765931 Sorghum bicolor
Sobic.001G439500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71755932-71765931 Sorghum bicolor
Sobic.001G439500 10.0kb downstream 10.0kb downstream 16740 true Chr01: 71739192-71755931 Sorghum bicolor
Sobic.001G439500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71739192-71749191 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197064 5267 Panicoideae View MSA
124578175 5269 Grass View MSA
122045367 5273 Angiosperm View MSA
121350915 5274 Embryophyte View MSA
123427551 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.397       Low
cufflinks 6.763     High  
cufflinks 7.348        
cufflinks 3.875        
cufflinks 4.452        
cufflinks 4.143        
cufflinks 8.447       High
cufflinks 7.949       High
cufflinks 5.789        
cufflinks 7.07        
cufflinks 8.575       High
cufflinks 5.079        
cufflinks 7.192        
cufflinks 5.281        
cufflinks 6.7        
cufflinks 6.357        
cufflinks 8.168       High
cufflinks 8.707       High
cufflinks 4.674        
cufflinks 5.257        
cufflinks 3.883        
cufflinks 3.949        
cufflinks 6.118        
cufflinks 5.616        
cufflinks 10.998     High High
cufflinks 8.035     High High
cufflinks 4.922        
cufflinks 1.581       Low
cufflinks 7.169        
cufflinks 4.823        

0 Strain