Gene : Sobic.001G439700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11913:SF16 - ACTIN-DEPOLYMERIZING FACTOR 5-RELATED Genomic Order:  4610
Name:  ? Sobic.001G439700 Secondary Identifier:  ? PAC:37941313
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G439700 0.5kb upstream 0.5kb upstream 5886 true Chr01: 71769694-71775579 Sorghum bicolor
Sobic.001G439700 0.5kb upstream 0.5kb upstream 500 false Chr01: 71769694-71770193 Sorghum bicolor
Sobic.001G439700 0.5kb downstream 0.5kb downstream 5886 true Chr01: 71770194-71776079 Sorghum bicolor
Sobic.001G439700 0.5kb downstream 0.5kb downstream 500 false Chr01: 71775580-71776079 Sorghum bicolor
Sobic.001G439700 1.0kb upstream 1.0kb upstream 6386 true Chr01: 71769194-71775579 Sorghum bicolor
Sobic.001G439700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71769194-71770193 Sorghum bicolor
Sobic.001G439700 1.0kb downstream 1.0kb downstream 6386 true Chr01: 71770194-71776579 Sorghum bicolor
Sobic.001G439700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71775580-71776579 Sorghum bicolor
Sobic.001G439700 2.0kb upstream 2.0kb upstream 7386 true Chr01: 71768194-71775579 Sorghum bicolor
Sobic.001G439700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71768194-71770193 Sorghum bicolor
Sobic.001G439700 2.0kb downstream 2.0kb downstream 7386 true Chr01: 71770194-71777579 Sorghum bicolor
Sobic.001G439700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71775580-71777579 Sorghum bicolor
Sobic.001G439700 5.0kb upstream 5.0kb upstream 10386 true Chr01: 71765194-71775579 Sorghum bicolor
Sobic.001G439700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71765194-71770193 Sorghum bicolor
Sobic.001G439700 5.0kb downstream 5.0kb downstream 10386 true Chr01: 71770194-71780579 Sorghum bicolor
Sobic.001G439700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71775580-71780579 Sorghum bicolor
Sobic.001G439700 10.0kb upstream 10.0kb upstream 15386 true Chr01: 71760194-71775579 Sorghum bicolor
Sobic.001G439700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71760194-71770193 Sorghum bicolor
Sobic.001G439700 10.0kb downstream 10.0kb downstream 15386 true Chr01: 71770194-71785579 Sorghum bicolor
Sobic.001G439700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71775580-71785579 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193453 5267 Panicoideae View MSA
124572495 5269 Grass View MSA
122046307 5273 Angiosperm View MSA
121310587 5274 Embryophyte View MSA
123348034 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.582        
cufflinks 16.542     High  
cufflinks 4.326       Low
cufflinks 4.25       Low
cufflinks 18.665     High  
cufflinks 14.813     High  
cufflinks 9.859        
cufflinks 5.692        
cufflinks 10.677        
cufflinks 14.175     High  
cufflinks 6.876        
cufflinks 6.905        
cufflinks 26.782     High High
cufflinks 16.127     High  
cufflinks 30.05     High High
cufflinks 24.421     High High
cufflinks 7.849        
cufflinks 9.634        
cufflinks 8.556        
cufflinks 4.818       Low
cufflinks 3.948       Low
cufflinks 15.036     High  
cufflinks 10.344        
cufflinks 9.562        
cufflinks 13.364     High  
cufflinks 9.555     High  
cufflinks 3.974       Low
cufflinks 0.98       Low
cufflinks 10.778        
cufflinks 41.125     High High

0 Strain