Gene : Sobic.001G438700 S. bicolor v3.1.1
Defline:  (1 of 108) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  4599
Name:  ? Sobic.001G438700 Secondary Identifier:  ? PAC:37938329
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G438700 0.5kb upstream 0.5kb upstream 2914 true Chr01: 71677440-71680353 Sorghum bicolor
Sobic.001G438700 0.5kb upstream 0.5kb upstream 500 false Chr01: 71677440-71677939 Sorghum bicolor
Sobic.001G438700 0.5kb downstream 0.5kb downstream 2914 true Chr01: 71677940-71680853 Sorghum bicolor
Sobic.001G438700 0.5kb downstream 0.5kb downstream 500 false Chr01: 71680354-71680853 Sorghum bicolor
Sobic.001G438700 1.0kb upstream 1.0kb upstream 3414 true Chr01: 71676940-71680353 Sorghum bicolor
Sobic.001G438700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71676940-71677939 Sorghum bicolor
Sobic.001G438700 1.0kb downstream 1.0kb downstream 3414 true Chr01: 71677940-71681353 Sorghum bicolor
Sobic.001G438700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71680354-71681353 Sorghum bicolor
Sobic.001G438700 2.0kb upstream 2.0kb upstream 4414 true Chr01: 71675940-71680353 Sorghum bicolor
Sobic.001G438700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71675940-71677939 Sorghum bicolor
Sobic.001G438700 2.0kb downstream 2.0kb downstream 4414 true Chr01: 71677940-71682353 Sorghum bicolor
Sobic.001G438700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71680354-71682353 Sorghum bicolor
Sobic.001G438700 5.0kb upstream 5.0kb upstream 7414 true Chr01: 71672940-71680353 Sorghum bicolor
Sobic.001G438700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71672940-71677939 Sorghum bicolor
Sobic.001G438700 5.0kb downstream 5.0kb downstream 7414 true Chr01: 71677940-71685353 Sorghum bicolor
Sobic.001G438700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71680354-71685353 Sorghum bicolor
Sobic.001G438700 10.0kb upstream 10.0kb upstream 12414 true Chr01: 71667940-71680353 Sorghum bicolor
Sobic.001G438700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71667940-71677939 Sorghum bicolor
Sobic.001G438700 10.0kb downstream 10.0kb downstream 12414 true Chr01: 71677940-71690353 Sorghum bicolor
Sobic.001G438700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71680354-71690353 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188337 5267 Panicoideae View MSA
124581861 5269 Grass View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.375        
cufflinks 0.841        
cufflinks 0.493        
cufflinks 0.875        
cufflinks 0.012     Low Low
cufflinks 3.447       High
cufflinks 0.943        
cufflinks 0.324        
cufflinks 0.91        
cufflinks 0.638        
cufflinks 0.75        
cufflinks 3.021       High
cufflinks 0.586        
cufflinks 1.715        
cufflinks 0.097     Low Low
cufflinks 1.123        
cufflinks 0.857        
cufflinks 0.88        
cufflinks 0.114        
cufflinks 0.819        
cufflinks 0.035     Low Low
cufflinks 0.88        
cufflinks 1.786        
cufflinks 1.317        
cufflinks 1.587        
cufflinks 0.691        
cufflinks 0.599        
cufflinks 2.619       High
cufflinks 0.154        
cufflinks 0.231        

0 Strain