Gene : Sobic.001G440200 S. bicolor v3.1.1
Defline:  (1 of 3) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  4616
Name:  ? Sobic.001G440200 Secondary Identifier:  ? PAC:37944515
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G440200 0.5kb upstream 0.5kb upstream 4712 true Chr01: 71817773-71822484 Sorghum bicolor
Sobic.001G440200 0.5kb upstream 0.5kb upstream 500 false Chr01: 71817773-71818272 Sorghum bicolor
Sobic.001G440200 0.5kb downstream 0.5kb downstream 4712 true Chr01: 71818273-71822984 Sorghum bicolor
Sobic.001G440200 0.5kb downstream 0.5kb downstream 500 false Chr01: 71822485-71822984 Sorghum bicolor
Sobic.001G440200 1.0kb upstream 1.0kb upstream 5212 true Chr01: 71817273-71822484 Sorghum bicolor
Sobic.001G440200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71817273-71818272 Sorghum bicolor
Sobic.001G440200 1.0kb downstream 1.0kb downstream 5212 true Chr01: 71818273-71823484 Sorghum bicolor
Sobic.001G440200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71822485-71823484 Sorghum bicolor
Sobic.001G440200 2.0kb upstream 2.0kb upstream 6212 true Chr01: 71816273-71822484 Sorghum bicolor
Sobic.001G440200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71816273-71818272 Sorghum bicolor
Sobic.001G440200 2.0kb downstream 2.0kb downstream 6212 true Chr01: 71818273-71824484 Sorghum bicolor
Sobic.001G440200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71822485-71824484 Sorghum bicolor
Sobic.001G440200 5.0kb upstream 5.0kb upstream 9212 true Chr01: 71813273-71822484 Sorghum bicolor
Sobic.001G440200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71813273-71818272 Sorghum bicolor
Sobic.001G440200 5.0kb downstream 5.0kb downstream 9212 true Chr01: 71818273-71827484 Sorghum bicolor
Sobic.001G440200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71822485-71827484 Sorghum bicolor
Sobic.001G440200 10.0kb upstream 10.0kb upstream 14212 true Chr01: 71808273-71822484 Sorghum bicolor
Sobic.001G440200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71808273-71818272 Sorghum bicolor
Sobic.001G440200 10.0kb downstream 10.0kb downstream 14212 true Chr01: 71818273-71832484 Sorghum bicolor
Sobic.001G440200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71822485-71832484 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186600 5267 Panicoideae View MSA
124571985 5269 Grass View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.261       Low
cufflinks 10.61     High  
cufflinks 92.237     High High
cufflinks 28.24     High  
cufflinks 77.188     High High
cufflinks 10.255        
cufflinks 3.154       Low
cufflinks 10.726     High  
cufflinks 9.568        
cufflinks 5.592        
cufflinks 28.335     High  
cufflinks 2.211       Low
cufflinks 40.165     High  
cufflinks 2.83       Low
cufflinks 106.823     High High
cufflinks 6.888        
cufflinks 4.905        
cufflinks 2.273       Low
cufflinks 39.944     High  
cufflinks 2.487       Low
cufflinks 14.419     High  
cufflinks 8.412        
cufflinks 2.619       Low
cufflinks 2.367       Low
cufflinks 5.658        
cufflinks 6.828     High  
cufflinks 76.036     High High
cufflinks 34.971     High  
cufflinks 4.108        
cufflinks 86.879     High High

0 Strain