Gene : Sobic.001G433300 S. bicolor v3.1.1
Defline:  (1 of 10) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  4542
Name:  ? Sobic.001G433300 Secondary Identifier:  ? PAC:37941828
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G433300 0.5kb upstream 0.5kb upstream 5089 true Chr01: 71181062-71186150 Sorghum bicolor
Sobic.001G433300 0.5kb upstream 0.5kb upstream 500 false Chr01: 71185651-71186150 Sorghum bicolor
Sobic.001G433300 0.5kb downstream 0.5kb downstream 5089 true Chr01: 71180562-71185650 Sorghum bicolor
Sobic.001G433300 0.5kb downstream 0.5kb downstream 500 false Chr01: 71180562-71181061 Sorghum bicolor
Sobic.001G433300 1.0kb upstream 1.0kb upstream 5589 true Chr01: 71181062-71186650 Sorghum bicolor
Sobic.001G433300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71185651-71186650 Sorghum bicolor
Sobic.001G433300 1.0kb downstream 1.0kb downstream 5589 true Chr01: 71180062-71185650 Sorghum bicolor
Sobic.001G433300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71180062-71181061 Sorghum bicolor
Sobic.001G433300 2.0kb upstream 2.0kb upstream 6589 true Chr01: 71181062-71187650 Sorghum bicolor
Sobic.001G433300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71185651-71187650 Sorghum bicolor
Sobic.001G433300 2.0kb downstream 2.0kb downstream 6589 true Chr01: 71179062-71185650 Sorghum bicolor
Sobic.001G433300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71179062-71181061 Sorghum bicolor
Sobic.001G433300 5.0kb upstream 5.0kb upstream 9589 true Chr01: 71181062-71190650 Sorghum bicolor
Sobic.001G433300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71185651-71190650 Sorghum bicolor
Sobic.001G433300 5.0kb downstream 5.0kb downstream 9589 true Chr01: 71176062-71185650 Sorghum bicolor
Sobic.001G433300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71176062-71181061 Sorghum bicolor
Sobic.001G433300 10.0kb upstream 10.0kb upstream 14589 true Chr01: 71181062-71195650 Sorghum bicolor
Sobic.001G433300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71185651-71195650 Sorghum bicolor
Sobic.001G433300 10.0kb downstream 10.0kb downstream 14589 true Chr01: 71171062-71185650 Sorghum bicolor
Sobic.001G433300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71171062-71181061 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994711 5273 Angiosperm View MSA
122193132 5267 Panicoideae View MSA
124585380 5269 Grass View MSA
121264928 5274 Embryophyte View MSA
123303350 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.669        
cufflinks 7.04     High  
cufflinks 7.764        
cufflinks 7.264        
cufflinks 11.464        
cufflinks 13.609     High High
cufflinks 9.591        
cufflinks 5.782       Low
cufflinks 14.858     High High
cufflinks 15.142     High High
cufflinks 7.57        
cufflinks 9.68        
cufflinks 11.565     High  
cufflinks 8.006        
cufflinks 11.744        
cufflinks 9.506        
cufflinks 8.93        
cufflinks 9.87        
cufflinks 7.341        
cufflinks 9.704        
cufflinks 28.334     High High
cufflinks 6.738        
cufflinks 7.325        
cufflinks 7.223        
cufflinks 9.019     High  
cufflinks 6.787     High  
cufflinks 7.683        
cufflinks 6.792        
cufflinks 6.459        
cufflinks 12.668     High  

0 Strain