Gene : Sobic.001G435300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10774//PTHR10774:SF83 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  4564
Name:  ? Sobic.001G435300 Secondary Identifier:  ? PAC:37943957
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G435300 0.5kb upstream 0.5kb upstream 4127 true Chr01: 71374939-71379065 Sorghum bicolor
Sobic.001G435300 0.5kb upstream 0.5kb upstream 500 false Chr01: 71374939-71375438 Sorghum bicolor
Sobic.001G435300 0.5kb downstream 0.5kb downstream 4127 true Chr01: 71375439-71379565 Sorghum bicolor
Sobic.001G435300 0.5kb downstream 0.5kb downstream 500 false Chr01: 71379066-71379565 Sorghum bicolor
Sobic.001G435300 1.0kb upstream 1.0kb upstream 4627 true Chr01: 71374439-71379065 Sorghum bicolor
Sobic.001G435300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71374439-71375438 Sorghum bicolor
Sobic.001G435300 1.0kb downstream 1.0kb downstream 4627 true Chr01: 71375439-71380065 Sorghum bicolor
Sobic.001G435300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71379066-71380065 Sorghum bicolor
Sobic.001G435300 2.0kb upstream 2.0kb upstream 5627 true Chr01: 71373439-71379065 Sorghum bicolor
Sobic.001G435300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71373439-71375438 Sorghum bicolor
Sobic.001G435300 2.0kb downstream 2.0kb downstream 5627 true Chr01: 71375439-71381065 Sorghum bicolor
Sobic.001G435300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71379066-71381065 Sorghum bicolor
Sobic.001G435300 5.0kb upstream 5.0kb upstream 8627 true Chr01: 71370439-71379065 Sorghum bicolor
Sobic.001G435300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71370439-71375438 Sorghum bicolor
Sobic.001G435300 5.0kb downstream 5.0kb downstream 8627 true Chr01: 71375439-71384065 Sorghum bicolor
Sobic.001G435300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71379066-71384065 Sorghum bicolor
Sobic.001G435300 10.0kb upstream 10.0kb upstream 13627 true Chr01: 71365439-71379065 Sorghum bicolor
Sobic.001G435300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71365439-71375438 Sorghum bicolor
Sobic.001G435300 10.0kb downstream 10.0kb downstream 13627 true Chr01: 71375439-71389065 Sorghum bicolor
Sobic.001G435300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71379066-71389065 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177690 5267 Panicoideae View MSA
124579712 5269 Grass View MSA
122044587 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346327 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low  
cufflinks 0.053     Low  
cufflinks 0.01     Low  
cufflinks 0.01     Low  
cufflinks 1.714       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.006     Low  
cufflinks 0.016     Low  
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.069     Low High
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14       High

0 Strain