Gene : Sobic.001G435100 S. bicolor v3.1.1
Defline:  (1 of 1) K03138 - transcription initiation factor TFIIF subunit alpha (TFIIF1, GTF2F1, TFG1) Genomic Order:  4562
Name:  ? Sobic.001G435100 Secondary Identifier:  ? PAC:37942443
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G435100 0.5kb upstream 0.5kb upstream 3828 true Chr01: 71363122-71366949 Sorghum bicolor
Sobic.001G435100 0.5kb upstream 0.5kb upstream 500 false Chr01: 71363122-71363621 Sorghum bicolor
Sobic.001G435100 0.5kb downstream 0.5kb downstream 3828 true Chr01: 71363622-71367449 Sorghum bicolor
Sobic.001G435100 0.5kb downstream 0.5kb downstream 500 false Chr01: 71366950-71367449 Sorghum bicolor
Sobic.001G435100 1.0kb upstream 1.0kb upstream 4328 true Chr01: 71362622-71366949 Sorghum bicolor
Sobic.001G435100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71362622-71363621 Sorghum bicolor
Sobic.001G435100 1.0kb downstream 1.0kb downstream 4328 true Chr01: 71363622-71367949 Sorghum bicolor
Sobic.001G435100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71366950-71367949 Sorghum bicolor
Sobic.001G435100 2.0kb upstream 2.0kb upstream 5328 true Chr01: 71361622-71366949 Sorghum bicolor
Sobic.001G435100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71361622-71363621 Sorghum bicolor
Sobic.001G435100 2.0kb downstream 2.0kb downstream 5328 true Chr01: 71363622-71368949 Sorghum bicolor
Sobic.001G435100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71366950-71368949 Sorghum bicolor
Sobic.001G435100 5.0kb upstream 5.0kb upstream 8328 true Chr01: 71358622-71366949 Sorghum bicolor
Sobic.001G435100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71358622-71363621 Sorghum bicolor
Sobic.001G435100 5.0kb downstream 5.0kb downstream 8328 true Chr01: 71363622-71371949 Sorghum bicolor
Sobic.001G435100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71366950-71371949 Sorghum bicolor
Sobic.001G435100 10.0kb upstream 10.0kb upstream 13328 true Chr01: 71353622-71366949 Sorghum bicolor
Sobic.001G435100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71353622-71363621 Sorghum bicolor
Sobic.001G435100 10.0kb downstream 10.0kb downstream 13328 true Chr01: 71363622-71376949 Sorghum bicolor
Sobic.001G435100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71366950-71376949 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194906 5267 Panicoideae View MSA
124571540 5269 Grass View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.098       High
cufflinks 0.39       Low
cufflinks 0.891        
cufflinks 1.204        
cufflinks 2.826        
cufflinks 0.706       Low
cufflinks 1.367        
cufflinks 0.625       Low
cufflinks 1.422        
cufflinks 1.701        
cufflinks 2.69        
cufflinks 2.827        
cufflinks 1.369        
cufflinks 3.373       High
cufflinks 2.281        
cufflinks 0.818       Low
cufflinks 1.419        
cufflinks 1.684        
cufflinks 1.267        
cufflinks 1.417        
cufflinks 2.931        
cufflinks 2.825        
cufflinks 3.729       High
cufflinks 3.949       High
cufflinks 0.507       Low
cufflinks 0.347       Low
cufflinks 2.493        
cufflinks 2.729        
cufflinks 2.098        
cufflinks 3.58       High

0 Strain