Gene : Sobic.001G429500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23086//PTHR23086:SF40 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE // SUBFAMILY NOT NAMED Genomic Order:  4502
Name:  ? Sobic.001G429500 Secondary Identifier:  ? PAC:37938291
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6351 Sorghum bicolor pathologic  
Sbicolor PWY-6352 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G429500 0.5kb upstream 0.5kb upstream 4101 true Chr01: 70861621-70865721 Sorghum bicolor
Sobic.001G429500 0.5kb upstream 0.5kb upstream 500 false Chr01: 70865222-70865721 Sorghum bicolor
Sobic.001G429500 0.5kb downstream 0.5kb downstream 4101 true Chr01: 70861121-70865221 Sorghum bicolor
Sobic.001G429500 0.5kb downstream 0.5kb downstream 500 false Chr01: 70861121-70861620 Sorghum bicolor
Sobic.001G429500 1.0kb upstream 1.0kb upstream 4601 true Chr01: 70861621-70866221 Sorghum bicolor
Sobic.001G429500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 70865222-70866221 Sorghum bicolor
Sobic.001G429500 1.0kb downstream 1.0kb downstream 4601 true Chr01: 70860621-70865221 Sorghum bicolor
Sobic.001G429500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 70860621-70861620 Sorghum bicolor
Sobic.001G429500 2.0kb upstream 2.0kb upstream 5601 true Chr01: 70861621-70867221 Sorghum bicolor
Sobic.001G429500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 70865222-70867221 Sorghum bicolor
Sobic.001G429500 2.0kb downstream 2.0kb downstream 5601 true Chr01: 70859621-70865221 Sorghum bicolor
Sobic.001G429500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 70859621-70861620 Sorghum bicolor
Sobic.001G429500 5.0kb upstream 5.0kb upstream 8601 true Chr01: 70861621-70870221 Sorghum bicolor
Sobic.001G429500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 70865222-70870221 Sorghum bicolor
Sobic.001G429500 5.0kb downstream 5.0kb downstream 8601 true Chr01: 70856621-70865221 Sorghum bicolor
Sobic.001G429500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 70856621-70861620 Sorghum bicolor
Sobic.001G429500 10.0kb upstream 10.0kb upstream 13601 true Chr01: 70861621-70875221 Sorghum bicolor
Sobic.001G429500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 70865222-70875221 Sorghum bicolor
Sobic.001G429500 10.0kb downstream 10.0kb downstream 13601 true Chr01: 70851621-70865221 Sorghum bicolor
Sobic.001G429500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 70851621-70861620 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027967 5273 Angiosperm View MSA
122175513 5267 Panicoideae View MSA
124588367 5269 Grass View MSA
121349579 5274 Embryophyte View MSA
123428114 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.248        
cufflinks 0.229       Low
cufflinks 15.216     High  
cufflinks 3.216        
cufflinks 33.626     High High
cufflinks 4.782        
cufflinks 4.399        
cufflinks 0.604       Low
cufflinks 2.734        
cufflinks 3.825        
cufflinks 4.414        
cufflinks 2.012        
cufflinks 11.275        
cufflinks 1.848        
cufflinks 10.092        
cufflinks 0.575       Low
cufflinks 4.69        
cufflinks 4.583        
cufflinks 3.303        
cufflinks 5.036        
cufflinks 23.05     High High
cufflinks 1.562        
cufflinks 2.163        
cufflinks 1.894        
cufflinks 0.025     Low Low
cufflinks 0.107       Low
cufflinks 20.169     High High
cufflinks 0.542       Low
cufflinks 2.986        
cufflinks 9.347        

0 Strain