Gene : Sobic.001G430800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13677:SF0 - PROTEIN F53H1.3, ISOFORM A Genomic Order:  4516
Name:  ? Sobic.001G430800 Secondary Identifier:  ? PAC:37939271
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G430800 0.5kb upstream 0.5kb upstream 4724 true Chr01: 70999444-71004167 Sorghum bicolor
Sobic.001G430800 0.5kb upstream 0.5kb upstream 500 false Chr01: 70999444-70999943 Sorghum bicolor
Sobic.001G430800 0.5kb downstream 0.5kb downstream 4724 true Chr01: 70999944-71004667 Sorghum bicolor
Sobic.001G430800 0.5kb downstream 0.5kb downstream 500 false Chr01: 71004168-71004667 Sorghum bicolor
Sobic.001G430800 1.0kb upstream 1.0kb upstream 5224 true Chr01: 70998944-71004167 Sorghum bicolor
Sobic.001G430800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 70998944-70999943 Sorghum bicolor
Sobic.001G430800 1.0kb downstream 1.0kb downstream 5224 true Chr01: 70999944-71005167 Sorghum bicolor
Sobic.001G430800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71004168-71005167 Sorghum bicolor
Sobic.001G430800 2.0kb upstream 2.0kb upstream 6224 true Chr01: 70997944-71004167 Sorghum bicolor
Sobic.001G430800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 70997944-70999943 Sorghum bicolor
Sobic.001G430800 2.0kb downstream 2.0kb downstream 6224 true Chr01: 70999944-71006167 Sorghum bicolor
Sobic.001G430800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71004168-71006167 Sorghum bicolor
Sobic.001G430800 5.0kb upstream 5.0kb upstream 9224 true Chr01: 70994944-71004167 Sorghum bicolor
Sobic.001G430800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 70994944-70999943 Sorghum bicolor
Sobic.001G430800 5.0kb downstream 5.0kb downstream 9224 true Chr01: 70999944-71009167 Sorghum bicolor
Sobic.001G430800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71004168-71009167 Sorghum bicolor
Sobic.001G430800 10.0kb upstream 10.0kb upstream 14224 true Chr01: 70989944-71004167 Sorghum bicolor
Sobic.001G430800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 70989944-70999943 Sorghum bicolor
Sobic.001G430800 10.0kb downstream 10.0kb downstream 14224 true Chr01: 70999944-71014167 Sorghum bicolor
Sobic.001G430800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71004168-71014167 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184948 5267 Panicoideae View MSA
124573474 5269 Grass View MSA
122046522 5273 Angiosperm View MSA
121346566 5274 Embryophyte View MSA
123427841 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.737        
cufflinks 7.271     High  
cufflinks 6.733        
cufflinks 5.243       Low
cufflinks 9.178        
cufflinks 9.528        
cufflinks 5.507       Low
cufflinks 7.22        
cufflinks 8.254        
cufflinks 6.356        
cufflinks 7.633        
cufflinks 9.172        
cufflinks 9.653        
cufflinks 8.973        
cufflinks 9.816        
cufflinks 8.334        
cufflinks 4.581       Low
cufflinks 5.292       Low
cufflinks 13.739     High High
cufflinks 4.975       Low
cufflinks 3.968       Low
cufflinks 8.846        
cufflinks 8.95        
cufflinks 9.527        
cufflinks 7.686        
cufflinks 7.543     High  
cufflinks 8.938        
cufflinks 5.136       Low
cufflinks 6.805        
cufflinks 7.227        

0 Strain