Gene : Sobic.001G432000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13166//PTHR13166:SF7 - PROTEIN C6ORF149 // LYR MOTIF-CONTAINING PROTEIN 4 Genomic Order:  4527
Name:  ? Sobic.001G432000 Secondary Identifier:  ? PAC:37943149
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G432000 0.5kb upstream 0.5kb upstream 1041 true Chr01: 71082097-71083137 Sorghum bicolor
Sobic.001G432000 0.5kb upstream 0.5kb upstream 500 false Chr01: 71082638-71083137 Sorghum bicolor
Sobic.001G432000 0.5kb downstream 0.5kb downstream 1041 true Chr01: 71081597-71082637 Sorghum bicolor
Sobic.001G432000 0.5kb downstream 0.5kb downstream 500 false Chr01: 71081597-71082096 Sorghum bicolor
Sobic.001G432000 1.0kb upstream 1.0kb upstream 1541 true Chr01: 71082097-71083637 Sorghum bicolor
Sobic.001G432000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 71082638-71083637 Sorghum bicolor
Sobic.001G432000 1.0kb downstream 1.0kb downstream 1541 true Chr01: 71081097-71082637 Sorghum bicolor
Sobic.001G432000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 71081097-71082096 Sorghum bicolor
Sobic.001G432000 2.0kb upstream 2.0kb upstream 2541 true Chr01: 71082097-71084637 Sorghum bicolor
Sobic.001G432000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 71082638-71084637 Sorghum bicolor
Sobic.001G432000 2.0kb downstream 2.0kb downstream 2541 true Chr01: 71080097-71082637 Sorghum bicolor
Sobic.001G432000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 71080097-71082096 Sorghum bicolor
Sobic.001G432000 5.0kb upstream 5.0kb upstream 5541 true Chr01: 71082097-71087637 Sorghum bicolor
Sobic.001G432000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 71082638-71087637 Sorghum bicolor
Sobic.001G432000 5.0kb downstream 5.0kb downstream 5541 true Chr01: 71077097-71082637 Sorghum bicolor
Sobic.001G432000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 71077097-71082096 Sorghum bicolor
Sobic.001G432000 10.0kb upstream 10.0kb upstream 10541 true Chr01: 71082097-71092637 Sorghum bicolor
Sobic.001G432000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 71082638-71092637 Sorghum bicolor
Sobic.001G432000 10.0kb downstream 10.0kb downstream 10541 true Chr01: 71072097-71082637 Sorghum bicolor
Sobic.001G432000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 71072097-71082096 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185522 5267 Panicoideae View MSA
124575196 5269 Grass View MSA
122044575 5273 Angiosperm View MSA
121346889 5274 Embryophyte View MSA
123426954 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.427     High High
cufflinks 1.708       Low
cufflinks 3.113       Low
cufflinks 8.45        
cufflinks 6.544        
cufflinks 12.203        
cufflinks 7.393        
cufflinks 6.482        
cufflinks 6.656        
cufflinks 5.76        
cufflinks 9.295        
cufflinks 8.323        
cufflinks 5.548        
cufflinks 14.043     High  
cufflinks 4.64        
cufflinks 3.6       Low
cufflinks 8.82        
cufflinks 8.017        
cufflinks 5.14        
cufflinks 6.995        
cufflinks 3.505       Low
cufflinks 20.38     High High
cufflinks 8.81        
cufflinks 8.394        
cufflinks 3.54       Low
cufflinks 2.437       Low
cufflinks 6.453        
cufflinks 84.259     High High
cufflinks 9.3        
cufflinks 7.298        

0 Strain