Gene : Sobic.001G426500 S. bicolor v3.1.1
Defline:  (1 of 3) PF06127 - Protein of unknown function (DUF962) (DUF962) Genomic Order:  4472
Name:  ? Sobic.001G426500 Secondary Identifier:  ? PAC:37941696
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G426500 0.5kb upstream 0.5kb upstream 1490 true Chr01: 70588201-70589690 Sorghum bicolor
Sobic.001G426500 0.5kb upstream 0.5kb upstream 500 false Chr01: 70589191-70589690 Sorghum bicolor
Sobic.001G426500 0.5kb downstream 0.5kb downstream 1490 true Chr01: 70587701-70589190 Sorghum bicolor
Sobic.001G426500 0.5kb downstream 0.5kb downstream 500 false Chr01: 70587701-70588200 Sorghum bicolor
Sobic.001G426500 1.0kb upstream 1.0kb upstream 1990 true Chr01: 70588201-70590190 Sorghum bicolor
Sobic.001G426500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 70589191-70590190 Sorghum bicolor
Sobic.001G426500 1.0kb downstream 1.0kb downstream 1990 true Chr01: 70587201-70589190 Sorghum bicolor
Sobic.001G426500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 70587201-70588200 Sorghum bicolor
Sobic.001G426500 2.0kb upstream 2.0kb upstream 2990 true Chr01: 70588201-70591190 Sorghum bicolor
Sobic.001G426500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 70589191-70591190 Sorghum bicolor
Sobic.001G426500 2.0kb downstream 2.0kb downstream 2990 true Chr01: 70586201-70589190 Sorghum bicolor
Sobic.001G426500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 70586201-70588200 Sorghum bicolor
Sobic.001G426500 5.0kb upstream 5.0kb upstream 5990 true Chr01: 70588201-70594190 Sorghum bicolor
Sobic.001G426500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 70589191-70594190 Sorghum bicolor
Sobic.001G426500 5.0kb downstream 5.0kb downstream 5990 true Chr01: 70583201-70589190 Sorghum bicolor
Sobic.001G426500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 70583201-70588200 Sorghum bicolor
Sobic.001G426500 10.0kb upstream 10.0kb upstream 10990 true Chr01: 70588201-70599190 Sorghum bicolor
Sobic.001G426500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 70589191-70599190 Sorghum bicolor
Sobic.001G426500 10.0kb downstream 10.0kb downstream 10990 true Chr01: 70578201-70589190 Sorghum bicolor
Sobic.001G426500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 70578201-70588200 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184845 5267 Panicoideae View MSA
124589649 5269 Grass View MSA
122044041 5273 Angiosperm View MSA
121350292 5274 Embryophyte View MSA
123424531 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.958        
cufflinks 0.497       Low
cufflinks 0.511       Low
cufflinks 2.02        
cufflinks 0.225       Low
cufflinks 1.558        
cufflinks 1.034        
cufflinks 3.194       High
cufflinks 0.939        
cufflinks 1.002        
cufflinks 2.557        
cufflinks 2.681       High
cufflinks 1.972        
cufflinks 2.807       High
cufflinks 2.943       High
cufflinks 1.116        
cufflinks 1.29        
cufflinks 1.121        
cufflinks 1.667        
cufflinks 1.514        
cufflinks 0.291       Low
cufflinks 2.893       High
cufflinks 1.795        
cufflinks 1.151        
cufflinks 1.144        
cufflinks 0.896        
cufflinks 4.121       High
cufflinks 1.273        
cufflinks 2.642       High
cufflinks 1.871        

0 Strain